| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4767 |
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| Symbol | ugpB |
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| ID | 6969519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4411748 |
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| End bp | 4413064 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643388463 |
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| Product | glycerol-3-phosphate transporter periplasmic binding protein |
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| Protein accession | YP_002272891 |
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| Protein GI | 209400161 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.552805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGT TACATTATAC AGCTTCAGCA CTGGCGCTCG GACTGGCGTT AATGGGGAAT
GCACAGGCAG TGACGACCAT TCCGTTCTGG CATTCTATGG AAGGGGAACT GGGTAAAGAG
GTGGATTCTC TGGCCCAACG TTTTAACGCC GAAAACCCGG ATTACAAAAT TGTACCGACC
TATAAAGGCA ATTACGAACA GAATTTAAGC GCGGGGATTG CCGCATTTCG TACCGGCAAT
GCTCCGGCTA TTTTGCAGGT TTATGAAGTT GGCACCGCCA CCATGATGGC GTCGAAAGCC
ATTAAACCGG TTTATGACGT GTTTAAAGAG GCGGGGATTC AATTCGATGA GTCGCAGTTT
GTGCCGACGG TTTCCGGTTA CTACTCCGAC AGCAAAACGG GCCACTTACT CTCCCAGCCA
TTCAACAGCT CGACTCCCGT TCTCTATTAC AACAAAGACG CCTTCAAGAA AGCGGGGTTA
GACCCGGAAC AACCGCCGAA AACCTGGCAG GATCTGGCGG ACTATGCCGC AAAACTAAAA
GCCTCCGGCA TGAAGTGCGG CTACGCCAGC GGCTGGCAGG GCTGGATCCA ACTGGAAAAC
TTTAGCGCCT GGAACGGTCT GCCGTTTGCC AGCAAAAACA ACGGCTTTGA CGGCACGGAT
GCGGTGCTGG AGTTCAACAA GCCGGAGCAG GTGAAACACA TCGCCATGCT CGAAGAGATG
AACAAGAAGG GCGATTTCAG CTACGTCGGG CGTAAGGATG AATCCACCGA GAAGTTCTAT
AACGGTGATT GCGCTATGAC CACCGCCTCT TCCGGTTCTC TCGCTAATAT TCGCGAGTAC
GCCAAATTCA ACTATGGCGT AGGCATGATG CCTTACGACG CCGATGCGAA AGATGCACCG
CAAAACGCCA TTATCGGCGG GGCCAGCCTG TGGGTGATGC AGGGCAAAGA TAAAGAAACG
TATACCGGCG TGGCGAAGTT CCTCGACTTC CTCGCGAAGC CAGAAAACGC TGCCGAGTGG
CATCAGAAAA CCGGTTATCT GCCAATCACC AAAGCAGCGT ATGACCTGAC CCGTGAGCAG
GGCTTTTATG AGAAAAACCC AGGGGCGGAT ACCGCGACGC GTCAGATGCT GAATAAGCCG
CCGTTGCCGT TCACCAAAGG GCTGCGTCTG GGCAACATGC CGCAGATCCG CGTGATTGTG
GATGAAGAGC TGGAGAGCGT GTGGACCGGT AAGAAGACAC CACAGCAGGC ACTGGATACC
GCCGTTGAGC GTGGAAATCA GTTGCTGCGC CGCTTTGAGA AATCGACGAA GTCTTAA
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| Protein sequence | MKPLHYTASA LALGLALMGN AQAVTTIPFW HSMEGELGKE VDSLAQRFNA ENPDYKIVPT
YKGNYEQNLS AGIAAFRTGN APAILQVYEV GTATMMASKA IKPVYDVFKE AGIQFDESQF
VPTVSGYYSD SKTGHLLSQP FNSSTPVLYY NKDAFKKAGL DPEQPPKTWQ DLADYAAKLK
ASGMKCGYAS GWQGWIQLEN FSAWNGLPFA SKNNGFDGTD AVLEFNKPEQ VKHIAMLEEM
NKKGDFSYVG RKDESTEKFY NGDCAMTTAS SGSLANIREY AKFNYGVGMM PYDADAKDAP
QNAIIGGASL WVMQGKDKET YTGVAKFLDF LAKPENAAEW HQKTGYLPIT KAAYDLTREQ
GFYEKNPGAD TATRQMLNKP PLPFTKGLRL GNMPQIRVIV DEELESVWTG KKTPQQALDT
AVERGNQLLR RFEKSTKS
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