| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3509 |
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| Symbol | |
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| ID | 6282189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3954113 |
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| End bp | 3955438 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642623088 |
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| Product | glycerol-3-phosphate transporter periplasmic binding protein |
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| Protein accession | YP_001897123 |
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| Protein GI | 187925481 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.839022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0272066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTCA AGCCGCTAAT CCGTTCGCTT TCCCTTGCCG CCGTATTGAG CGTCGGCCTC
AGCCAGGCGG CTCACGCCGC GACTGAGATC CAGTTCTGGC ACGGCATGGA AGCCGCGCTG
GGCGAACGGC TGAACGACAT CGCCAACGCG TTCAACGCAT CGCAAAGCGA CTACAAGATC
GTGCCGGTCT TCAAAGGCAC CTACGATCAG ACGCTCGCCG CGGGCATCGC CGCGTATCGT
AGCGGCAATG CGCCGGCCAT CCTGCAGGTC TACGAAGTCG GCACCGCCAC GATGATGCAG
GCGAAGAAGG CGGTGATCCC CGTCTCGGAA GTGTTCAAGC AAGCCGGCGT GCCGCTCGAT
GAGAAGGCCT TCGTGCCGAC CATCGCCAGC TATTACAGCG ACGCCAAAAC CGGCGAGCTG
ATCTCGATGC CGTTCAACAG CTCGACGCCG GTGCTGTACT ACAACAAGGA CGCCTTCAAG
AAAGCCGGCC TCGACCCGAA CCAGCCGCCG AAAACCTGGG CCGAATTGCA GACCGACGCG
CAGAAGCTGA AGGCGTCGGG CATGGCCTGC GGCTATTCGT CGGGCTGGCA GAGCTGGATT
CAGCTCGAAA ACTACAGCGC GTGGCACGGC GCGCCGTTCG CGTCGAAGAA CAATGGCTTC
GACGGCCCGG ACGCGCAACT GGAATTCAAC AAGCCGCTGC AGGTCGCGCA TATCCAGTTC
CTGCAGAACA TGCAGAAGGA AGGCACGTTC ACCTACGTCG GCCGCAAGGA CGAACCGGTG
TCGAAGTTCT ATAGCGGCGA CTGCGGGATC ATCACCAACT CGTCGGGATC GCTCGCCACG
ATCAAGAAGT ACGCGAAGTT CAACTTCGGC ACCGGCATGA TGCCGTACGA CGCAAGCGTG
AAGGGCGCGC CGCAGAACGC GATCATCGGC GGAGCGAGCC TGTGGGTGCT GTCGGGCAAG
GATCCGGCCG TCTATAAGGG CGTGGCGAAA TTCCTTTCGT ACCTGTCGTC GGCGCCGGTT
GCCGCGAAGT GGCATCAGGA CACCGGCTAT CTGCCGGTCA CCACCGCCGC TTATCAACTT
ACCCAGCAGC AAGGCTTCTA CGACAAGAAT CCGGGCAGCG ACACTGCCAT CAAACAGATG
CTCAACAAGC CGCCGCTGCC GTACACCAAG GGCTTGCGTC TGGGCAACAT GCCGCAGATC
CGCACGGTCA TCGACGAAGA ACTCGAACAG GTATGGGCAC AGAAGAAGAC GCCGCAACAG
GCGCTCGACG CCTCGGTCTC GCGTGGCGAT GAACTGCTGC GCCGCTTCGA AAAAGCCGGC
AATTAA
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| Protein sequence | MSFKPLIRSL SLAAVLSVGL SQAAHAATEI QFWHGMEAAL GERLNDIANA FNASQSDYKI
VPVFKGTYDQ TLAAGIAAYR SGNAPAILQV YEVGTATMMQ AKKAVIPVSE VFKQAGVPLD
EKAFVPTIAS YYSDAKTGEL ISMPFNSSTP VLYYNKDAFK KAGLDPNQPP KTWAELQTDA
QKLKASGMAC GYSSGWQSWI QLENYSAWHG APFASKNNGF DGPDAQLEFN KPLQVAHIQF
LQNMQKEGTF TYVGRKDEPV SKFYSGDCGI ITNSSGSLAT IKKYAKFNFG TGMMPYDASV
KGAPQNAIIG GASLWVLSGK DPAVYKGVAK FLSYLSSAPV AAKWHQDTGY LPVTTAAYQL
TQQQGFYDKN PGSDTAIKQM LNKPPLPYTK GLRLGNMPQI RTVIDEELEQ VWAQKKTPQQ
ALDASVSRGD ELLRRFEKAG N
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