More than 300 homologs were found in PanDaTox collection
for query gene Ajs_3306 on replicon NC_008782
Organism: Acidovorax sp. JS42



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  98.38 
 
 
431 aa  873    Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  100 
 
 
431 aa  885    Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  86.54 
 
 
431 aa  773    Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  60.14 
 
 
431 aa  522  1e-147  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  60.6 
 
 
431 aa  506  9.999999999999999e-143  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  55.47 
 
 
425 aa  476  1e-133  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_012669  Bcav_2846  extracellular solute-binding protein family 1  45.41 
 
 
435 aa  342  1e-92  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.687638 
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  35.75 
 
 
452 aa  260  4e-68  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  33.73 
 
 
441 aa  257  3e-67  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  32.86 
 
 
435 aa  203  5e-51  Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  31.16 
 
 
436 aa  196  7e-49  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  31.45 
 
 
440 aa  192  1e-47  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0631  extracellular solute-binding protein family 1  32.92 
 
 
435 aa  191  2.9999999999999997e-47  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  31.09 
 
 
445 aa  188  2e-46  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0845  extracellular solute-binding protein family 1  32.43 
 
 
435 aa  185  1.0000000000000001e-45  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  30.36 
 
 
458 aa  176  5e-43  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  31.04 
 
 
458 aa  176  6e-43  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  31.04 
 
 
458 aa  176  7e-43  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  31.04 
 
 
458 aa  176  8e-43  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  31.04 
 
 
458 aa  176  9e-43  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0256  glycerol-3-phosphate transporter periplasmic binding protein  26.76 
 
 
439 aa  175  9.999999999999999e-43  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3962  glycerol-3-phosphate transporter periplasmic binding protein  26.76 
 
 
439 aa  175  9.999999999999999e-43  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  30.81 
 
 
458 aa  174  1.9999999999999998e-42  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  30.81 
 
 
458 aa  174  1.9999999999999998e-42  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  30.81 
 
 
458 aa  174  1.9999999999999998e-42  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  30.81 
 
 
458 aa  174  1.9999999999999998e-42  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  30.81 
 
 
458 aa  174  1.9999999999999998e-42  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3655  glycerol-3-phosphate transporter periplasmic binding protein  26.53 
 
 
439 aa  172  6.999999999999999e-42  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  27.29 
 
 
444 aa  167  2.9999999999999998e-40  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  27.69 
 
 
439 aa  167  2.9999999999999998e-40  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  26.77 
 
 
444 aa  165  1.0000000000000001e-39  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  26.68 
 
 
440 aa  164  3e-39  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  27.33 
 
 
441 aa  163  6e-39  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  26.02 
 
 
438 aa  160  4e-38  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA2744  glycerol-3-phosphate transporter periplasmic binding protein  27.56 
 
 
441 aa  160  5e-38  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3726  glycerol-3-phosphate transporter periplasmic binding protein  27.56 
 
 
441 aa  160  5e-38  Burkholderia pseudomallei 1710b  Bacteria  normal  0.268589  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3209  glycerol-3-phosphate transporter periplasmic binding protein  27.56 
 
 
441 aa  160  5e-38  Burkholderia mallei SAVP1  Bacteria  normal  0.0248662  n/a   
 
 
-
 
NC_008836  BMA10229_A1760  glycerol-3-phosphate transporter periplasmic binding protein  27.56 
 
 
441 aa  160  5e-38  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2794  glycerol-3-phosphate transporter periplasmic binding protein  27.56 
 
 
441 aa  160  5e-38  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  27.44 
 
 
437 aa  160  5e-38  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2052  extracellular solute-binding protein  26.39 
 
 
438 aa  160  6e-38  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  26.41 
 
 
438 aa  159  7e-38  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  26.41 
 
 
438 aa  159  7e-38  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  26.41 
 
 
438 aa  159  7e-38  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03302  glycerol-3-phosphate transporter subunit  26.23 
 
 
438 aa  159  1e-37  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0262  extracellular solute-binding protein family 1  26.23 
 
 
438 aa  159  1e-37  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_0263  glycerol-3-phosphate transporter periplasmic binding protein  26.23 
 
 
438 aa  159  1e-37  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_03255  hypothetical protein  26.23 
 
 
438 aa  159  1e-37  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3650  glycerol-3-phosphate transporter periplasmic binding protein  26.23 
 
 
438 aa  159  1e-37  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4767  glycerol-3-phosphate transporter periplasmic binding protein  26.23 
 
 
438 aa  159  1e-37  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.552805 
 
 
-
 
NC_010498  EcSMS35_3732  glycerol-3-phosphate transporter periplasmic binding protein  26.18 
 
 
438 aa  158  1e-37  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  29.92 
 
 
439 aa  158  2e-37  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010658  SbBS512_E3870  glycerol-3-phosphate transporter periplasmic binding protein  26.23 
 
 
438 aa  158  2e-37  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3755  glycerol-3-phosphate transporter periplasmic binding protein  27.56 
 
 
441 aa  158  2e-37  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_3931  glycerol-3-phosphate transporter periplasmic binding protein  26 
 
 
438 aa  157  2e-37  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0475  extracellular solute-binding protein family 1  28.57 
 
 
397 aa  157  3e-37  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I3021  glycerol-3-phosphate transporter periplasmic binding protein  27.33 
 
 
441 aa  157  4e-37  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  25.79 
 
 
438 aa  157  4e-37  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  25.65 
 
 
437 aa  157  4e-37  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_012880  Dd703_3861  glycerol-3-phosphate transporter periplasmic binding protein  27.21 
 
 
439 aa  155  1e-36  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0374  glycerol-3-phosphate transporter periplasmic binding protein  26.68 
 
 
444 aa  155  2e-36  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2712  glycerol-3-phosphate transporter periplasmic binding protein  27.02 
 
 
443 aa  154  2e-36  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.290307  n/a   
 
 
-
 
NC_008542  Bcen2424_0395  glycerol-3-phosphate transporter periplasmic binding protein  27.02 
 
 
443 aa  154  2e-36  Burkholderia cenocepacia HI2424  Bacteria  normal  0.954301  n/a   
 
 
-
 
NC_013946  Mrub_0791  extracellular solute-binding protein family 1  27.76 
 
 
399 aa  153  7e-36  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.418273 
 
 
-
 
NC_013421  Pecwa_2173  extracellular solute-binding protein family 1  27.42 
 
 
445 aa  152  1e-35  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00822083  n/a   
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  26.62 
 
 
435 aa  152  1e-35  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1264  glycerol-3-phosphate-binding periplasmic lipoprotein signal peptide  26.02 
 
 
438 aa  151  2e-35  Ralstonia solanacearum GMI1000  Bacteria  normal  0.400828  normal  0.517414 
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  26.74 
 
 
437 aa  151  2e-35  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_007951  Bxe_A0448  glycerol-3-phosphate transporter periplasmic binding protein  25.96 
 
 
441 aa  150  5e-35  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  24.25 
 
 
437 aa  150  5e-35  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_010681  Bphyt_3509  glycerol-3-phosphate transporter periplasmic binding protein  25.78 
 
 
441 aa  150  5e-35  Burkholderia phytofirmans PsJN  Bacteria  normal  0.839022  normal  0.0272066 
 
 
-
 
NC_007510  Bcep18194_A3492  glycerol-3-phosphate transporter periplasmic binding protein  26.01 
 
 
444 aa  149  6e-35  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2709  glycerol-3-phosphate transporter periplasmic binding protein  25.34 
 
 
441 aa  149  7e-35  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0323  glycerol-3-phosphate transporter periplasmic binding protein  26.01 
 
 
444 aa  149  9e-35  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.839712 
 
 
-
 
NC_012917  PC1_1881  extracellular solute-binding protein family 1  27.42 
 
 
445 aa  148  2.0000000000000003e-34  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000340671  n/a   
 
 
-
 
NC_008390  Bamb_0314  glycerol-3-phosphate transporter periplasmic binding protein  25.78 
 
 
444 aa  148  2.0000000000000003e-34  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4045  glycerol-3-phosphate transporter periplasmic binding protein  26.19 
 
 
439 aa  148  2.0000000000000003e-34  Dickeya zeae Ech1591  Bacteria  normal  0.661181  n/a   
 
 
-
 
NC_010682  Rpic_1092  extracellular solute-binding protein family 1  25.82 
 
 
438 aa  147  4.0000000000000006e-34  Ralstonia pickettii 12J  Bacteria  normal  0.0503452  normal 
 
 
-
 
NC_012856  Rpic12D_1185  extracellular solute-binding protein family 1  25.59 
 
 
438 aa  145  1e-33  Ralstonia pickettii 12D  Bacteria  normal  0.276437  normal 
 
 
-
 
NC_011884  Cyan7425_3276  extracellular solute-binding protein family 1  27.09 
 
 
420 aa  145  2e-33  Cyanothece sp. PCC 7425  Bacteria  normal  0.147153  normal  0.336546 
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  29.82 
 
 
448 aa  144  3e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2730  extracellular solute-binding protein family 1  26.34 
 
 
399 aa  144  4e-33  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0476  extracellular solute-binding protein family 1  25.68 
 
 
401 aa  142  8e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0298  glycerol-3-phosphate transporter periplasmic binding protein  25.34 
 
 
444 aa  142  9e-33  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4449  extracellular solute-binding protein  26.61 
 
 
446 aa  142  1.9999999999999998e-32  Xanthobacter autotrophicus Py2  Bacteria  decreased coverage  0.00843107  normal  0.115126 
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  28.12 
 
 
444 aa  140  4.999999999999999e-32  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_007925  RPC_0097  extracellular solute-binding protein  24.6 
 
 
434 aa  139  7.999999999999999e-32  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2738  extracellular solute-binding protein  24.4 
 
 
438 aa  138  2e-31  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.345118  n/a   
 
 
-
 
NC_007973  Rmet_2055  extracellular solute-binding protein  25.06 
 
 
436 aa  138  2e-31  Cupriavidus metallidurans CH34  Bacteria  normal  0.822621  normal 
 
 
-
 
NC_007964  Nham_3686  extracellular solute-binding protein  24.48 
 
 
460 aa  136  9e-31  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  30.34 
 
 
414 aa  135  9.999999999999999e-31  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0714  ABC transporter substrate-binding protein  25.06 
 
 
429 aa  135  9.999999999999999e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  27.59 
 
 
441 aa  135  9.999999999999999e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2093  glycerol-3-phosphate ABC transporter extracellular solute-binding family 1 protein  25.44 
 
 
435 aa  134  3.9999999999999996e-30  Psychromonas ingrahamii 37  Bacteria  normal  0.107678  normal  0.487826 
 
 
-
 
NC_012848  Rleg_5204  extracellular solute-binding protein family 1  26.74 
 
 
440 aa  133  5e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.306263 
 
 
-
 
NC_008010  Dgeo_2662  extracellular solute-binding protein  26.98 
 
 
433 aa  133  6e-30  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.377519  n/a   
 
 
-
 
NC_009668  Oant_3750  extracellular solute-binding protein  24.6 
 
 
433 aa  133  6.999999999999999e-30  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.316129  n/a   
 
 
-
 
NC_007778  RPB_4664  extracellular solute-binding protein  23.08 
 
 
448 aa  133  6.999999999999999e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.593429 
 
 
-
 
NC_011004  Rpal_5274  extracellular solute-binding protein family 1  24.54 
 
 
442 aa  132  7.999999999999999e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0849  extracellular solute-binding protein  25.49 
 
 
434 aa  131  2.0000000000000002e-29  Ruegeria sp. TM1040  Bacteria  normal  0.0177782  normal 
 
 
-
 
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