Gene Ajs_3306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3306 
Symbol 
ID4672016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3491302 
End bp3492597 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content64% 
IMG OID639840345 
Productextracellular solute-binding protein 
Protein accessionYP_987504 
Protein GI121595608 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCA AGATGTTTTT GAAGACCTTG GCTGCGCCCG CCCTCGCGGC CATGGCGCTG 
TGTGCCGTTA CTGCCCATGC GCAGGCCCCG GTGGAGGTGC CGTTCTACTA CCCCGTGGCC
GTGGGCGGCC CCATCACCAA GGTGATCGAC GGCTACGCGG CCGATTTCAA CAAGGCGCAT
CCGCAGTACA GGGTGGTGCC CATCTATGCC GGCACGTACC AGGAGACCAT CGTCAAGGCG
CTCACCGCGC ACAAGTCCGC CAAGGCGCCG GCCACTTCGG TGCTGCTGTC CACCGACATG
TTCACGCTGA TTGATGAGGA CGCCATCGCC CCCATCGACG ACTTCGTGAA GACCGACGCC
GACCGTGCCT GGCTCAAGGG CTTCTACCCG GCCTTCATGG CCAACAGCCA GACGGGCGGC
AAGACCTGGG GCGTGCCGTT CCAGCGCTCC ACGGTGGTCA TGTACTACAA CAAGGACGCG
TTCAAGGACG CCGGCCTGGA CCCGAACAAG GCGCCCCAGA ACTGGAAGGA ACTGAAGGAA
GCGGCGCACA AGCTCACCAA GAAGGACGCC AGCGGCAACG TGACGCAGTA CGGCATCCAG
ATCCCGTCCA CCGGCTTTGC CTACTGGATG CTGCAGACGC TGACCACGCC CAACGACGTG
CTGCTGGCCA ACGGTGCCGG CACCCAGGTC ACCTTCGACC ACCCCAAGGT CATCGAGGCG
CTGGACTTCT GGGTCAACCT GGCCAAGGAA GGCGTGCACC CCAAGGGCGT GGTGGAGTGG
GGTACGACGC CCAAGGACTT CTTCGAAAAG AAGGCCGCGA TCATCATCAC GACCACGGGC
AACCTGACCA ACGTGAAGAA CAACGCCAAG TTCGACTTCG GCGTGGCCCA GATTGCCGGC
AACCTGCGCA AGGGCTCGCC CACGGGCGGC GGCAACTTCT ACATCTTCAA GAAGGCGCCC
CAAGAGCAGC AGCAGGCCGC GTTCGAGTTC GCCAAGTGGA TCACCCAGCC CGAGCGCGCC
GCGCAGTGGA GCATGGACAG CGGCTACGTG GCCGTCTCGC CTGCTGCCTA CGACACGCCG
GCGCTCAAAA AATACGGCCA GGACTTCCCG CCCGCGCTGG TGGCGCGCGA CCAACTGCCG
GTATCGGTGG CCGAGTTCTC CACGCACGAC AACCAGCGCG TGACCAAGGT GCTCAACGAC
GCCATCCAGG CCGCGCTGAA CGGCACCAAG ACCTCGGCGC AAGCGATGAA GGACGCCCAG
CGCGAGGCCG ACCGCATTCT GCGCAGCTAC AAGTAA
 
Protein sequence
MQRKMFLKTL AAPALAAMAL CAVTAHAQAP VEVPFYYPVA VGGPITKVID GYAADFNKAH 
PQYRVVPIYA GTYQETIVKA LTAHKSAKAP ATSVLLSTDM FTLIDEDAIA PIDDFVKTDA
DRAWLKGFYP AFMANSQTGG KTWGVPFQRS TVVMYYNKDA FKDAGLDPNK APQNWKELKE
AAHKLTKKDA SGNVTQYGIQ IPSTGFAYWM LQTLTTPNDV LLANGAGTQV TFDHPKVIEA
LDFWVNLAKE GVHPKGVVEW GTTPKDFFEK KAAIIITTTG NLTNVKNNAK FDFGVAQIAG
NLRKGSPTGG GNFYIFKKAP QEQQQAAFEF AKWITQPERA AQWSMDSGYV AVSPAAYDTP
ALKKYGQDFP PALVARDQLP VSVAEFSTHD NQRVTKVLND AIQAALNGTK TSAQAMKDAQ
READRILRSY K