| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5274 |
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| Symbol | |
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| ID | 6412975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5688105 |
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| End bp | 5689433 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642715164 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_001994236 |
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| Protein GI | 192293631 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGGAA TTTTGGGAAG ACTCGCGCAG ATCGCCGCCG CCGTGCTGGT TTGCGCCACC
GCTGGTATCG TCCCCGCTGG CGCCGCCACC GAAATTGCCT GGTGGCATGC GATGTCCGGT
GAGCTCGGCC GGCAGCTTGA GAAACTGGCG GCGGATTTCA ATGCGTCGCA ATCCGATTAC
CGCGTGGTCC CGACCTACAA GGGCAATTAC ACCCAGACGG TGACCGCGGC GATCTTCGCG
TTTCGCTCCT CCAGCCAGCC GACGATCGTG CAGGTCAACG AGATCGCCAC CGCCACCATG
ATGGCGGCCA AGGGCGCGGT CTATCCGGTG TACGAGCTGA TGCGCGACGA GAGCGAGGTG
TTCTCGCCGG CCGACTATCT GCCGGCCGTC ACCGGGTACT ACACCGATCT TAGCGGCAAC
ATGCTGTCGT TTCCGTTCAA CGCGTCGACA CCAATTCTGT ACTACAACAA GACGCTGTTT
CGTCGCGCTG GGCTCGATCC GGAGGTGCCG CCGCCGACTT GGCCGGAAGT CGGGACGATG
GCGAAGCGGC TGATCGACGC CGGCGCAGCG TGCGGCTTCA CCACCTCGTG GCCGTCCTGG
GTGCATATCG AGAACTTTTC CGCCTATCAC AACCTGCCGC TGGCGACCCA GTCGAACGGG
CTGGGCGGGC TTGATGCCGA ACTGGTGTTC AACAATCCGG CGGTGGTGCG CCATATCGCG
CAGCTTGCCG ATTGGCAGAA GACCAAGACC TTCGATTACG GCGGCCGCGC CACCGCGGCC
GAACCGCGCT TCCAGCAGGG TGACTGCGGC ATCTTCATCG GCTCATCGGC AACGCGGGCC
GACATCCTGG CCAACGCCAA GTTCGATGTC GGCTACGGCC GGCTGCCGTA TTGGCCGGAC
ATCGCCGGCG CGCCGCAGAA CACCATCATC GGCGGTGCCA CACTATGGGT GCTGCGCGGC
CATTCGGCGG GCGAATACAA AGGCGCCGCC AAGTTCTTCG CCTACCTGTC GAAGCCGGAA
GTTCAGGCGG CCTGGCATCA GCACACCGGC TACCTGCCGA TCACAAAGGC GGCCTACGAT
CTCACCCGCG CCCAGGGCTT CTACGACCGC AATCCCGGCA CCGCGATCTC GATCGAACAG
ATCACGCTGA AGCCGCCGAC CGAGAATTCG CGCGGGCTGC GGCTCGGCTC GTTCGTGCTG
GTGCGGGCGG CGATCGAAGA CGAGATCGAA CACGCGGTGC GGGGCGATAA GCCGGCGAAA
GAGGCGATGG ACGCGGCGGT CGAGCGCGGC AACAAGCTGC TGCGGCAGTT CGAACGCACC
AAGCCGTAA
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| Protein sequence | MAGILGRLAQ IAAAVLVCAT AGIVPAGAAT EIAWWHAMSG ELGRQLEKLA ADFNASQSDY
RVVPTYKGNY TQTVTAAIFA FRSSSQPTIV QVNEIATATM MAAKGAVYPV YELMRDESEV
FSPADYLPAV TGYYTDLSGN MLSFPFNAST PILYYNKTLF RRAGLDPEVP PPTWPEVGTM
AKRLIDAGAA CGFTTSWPSW VHIENFSAYH NLPLATQSNG LGGLDAELVF NNPAVVRHIA
QLADWQKTKT FDYGGRATAA EPRFQQGDCG IFIGSSATRA DILANAKFDV GYGRLPYWPD
IAGAPQNTII GGATLWVLRG HSAGEYKGAA KFFAYLSKPE VQAAWHQHTG YLPITKAAYD
LTRAQGFYDR NPGTAISIEQ ITLKPPTENS RGLRLGSFVL VRAAIEDEIE HAVRGDKPAK
EAMDAAVERG NKLLRQFERT KP
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