| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0656 |
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| Symbol | |
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| ID | 7172543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 790871 |
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| End bp | 792166 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643539156 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002435081 |
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| Protein GI | 218885760 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 0.31335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCT TCAGAAAAGC GTGCACCCTG GCGGCGGCTG CCCTGCTGTC GCTGACCCTG
CTGGCGGGCA CCGCACTGGC GGAAAAGGTG AACCTGACCT TCTACTTCCC TGTTTCCGTC
GGCGGACCCA TCACCAAGAT CGTGGAGGGC ATGACCGAGC AGTTCATGAA GGAACACCCG
GACATCAAGG TCACTCCGGT GTACGCGGGC ATCTACCGCG AAACCCTCAC CAAGGCCCTT
ACCGCCCTGC GCGGGGGCGA GCCGCCGCAC GTGGCGGTGC TGCTGTCCAC CGACATGTAC
ACCCTCATCG ACGAAGACGC GGTGGTGGCC TACGACGACA TCCTGAAGCC GGAGGAAATG
GGCTTCACCA AGGCGTTCTT CCCCGGTTTC ATGCGCAACA GCCAGACCGG CGGCAAGACC
TGGGGCATTC CGTTCCAGCG TTCCACCATC GTGATGTACT GGAACAAGGA GGCCTTCAAG
GCCGCCGGGC TTGATCCCGA AAAGGGCCCC GCCAACTGGA ACGAACTGGT GGAAATGGGC
AAGAAGCTGA CCGTGCGCGA TGCCTCCGGC AAGGTCACCC AGTGGGGCGT GGCCATTCCC
TCCACCGGGT ACGCCTACTG GATGTTCCAG GCCCTGGCCA TCCAGAACGG CGTGGAACTG
ATGAACGCCG AAGGCACCAG GACCGACTTC GACAACCCCA AGGCCATCGA GGCCCTGCAA
TTCCTGGTGG ATCTGGCCTA CAAGCACGAG GTGTCGCCCA AGGGCACCAT CGACTGGGCC
ACCACCCCGC GCGATTTCTT CGAGCGCAAG TCCGCCATCA TGTGGACCAC CACCGGCAAC
CTGACCAACG TGCGCACCAA CGCGCCCTTC CCCTTCGGCG TGGGCATGCT GCCCGCCAGC
GCCCGCCCCG GTTCGCCCAC GGGCGGCGGC AACTTCTACA TCTTCAAGAA GGCCACCCCC
GCAGAGCGCA AGGCTGCGGT CGACTTCGTG CAGTGGATGA CCAGCGCGGA ACGCGCCGCC
CAGTGGGGCA TCGACACCGG CTACGTGGCC GTGCGCCCCG ACGCGTGGGA AACCCCGGCC
ATGAAGGACT ACGTGGCCAA GTTCCCCGTG GCCGCCGTGG CCCGCGACCA GCTGGCCCAC
GCCGTGCCCG AACTGTCCAC CCATGACAAC CAGCGCGTGA CCAAGGCGCT GGACGACGCC
ATCCAGGCCG CCGTGACCGG CTCCAAGAAG CCCGCCGACG CCCTGAAGGA CGCCCAGAAG
GAAGCAGAAC GCATCCTGCG CCGTTACGGC AAGTAG
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| Protein sequence | MTGFRKACTL AAAALLSLTL LAGTALAEKV NLTFYFPVSV GGPITKIVEG MTEQFMKEHP
DIKVTPVYAG IYRETLTKAL TALRGGEPPH VAVLLSTDMY TLIDEDAVVA YDDILKPEEM
GFTKAFFPGF MRNSQTGGKT WGIPFQRSTI VMYWNKEAFK AAGLDPEKGP ANWNELVEMG
KKLTVRDASG KVTQWGVAIP STGYAYWMFQ ALAIQNGVEL MNAEGTRTDF DNPKAIEALQ
FLVDLAYKHE VSPKGTIDWA TTPRDFFERK SAIMWTTTGN LTNVRTNAPF PFGVGMLPAS
ARPGSPTGGG NFYIFKKATP AERKAAVDFV QWMTSAERAA QWGIDTGYVA VRPDAWETPA
MKDYVAKFPV AAVARDQLAH AVPELSTHDN QRVTKALDDA IQAAVTGSKK PADALKDAQK
EAERILRRYG K
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