Gene Bamb_0314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0314 
Symbol 
ID4308788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp354980 
End bp356314 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content65% 
IMG OID638148102 
Productglycerol-3-phosphate transporter periplasmic binding protein 
Protein accessionYP_772208 
Protein GI115350369 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGA AGCCTGCGGG GACCACGATT CGCTCGATCG CGCTTGGCGG CGCGCTGATG 
TTCGGTGTGC AGCATGCGGC GTTCGCCGCG ACGGAGATCC AGTTCTGGCA TGCGATGGAG
TCGGCGCTCG GCGAGCGCGT AAACGAGCTC GCCACGCAGT TCAACGCATC GCAGAGCGAC
TACAAGATCG TGCCGGTCTT CAAGGGCACC TACGACCAGG CGCTCGCGGC AGGCATCGCC
GCCTATCGCA GCGGCAACGC GCCGGCGATC CTCCAGGTCT ATGAAGTCGG CACCGCGACG
ATGATGAAGG CGAAGAAGGC CGTCGTGCCC GTCTACGACG TGTTCAAGCA GGCCGGCGTG
CCGCTCGACG AAAAGGCGTT CGTGCCGACC ATCGCGAGCT ACTACAGCGA TGCGAAGACG
GGCCATCTCG TGTCGATGCC GTTCAACAGC TCGACGCCGG TGCTGTACTA CAACAAGGAC
GCGTTCAAGA AGGCCGGGCT CGATCCGAAC CAGCCGCCGA AGACGTGGGC GGACGTGCAG
GCCGATGCGG AGAAACTGCG CAAGTCGGGG ATGACCTGCG GCTTCACGAC CGGCTGGCAG
GGCTGGATCC AGCTCGAGAA CTACAGCGTG TGGCACGCGC TGCCGTTCGC GAGCCGCAAC
AACGGCTTCG ACGGCGCCGA CGCGGTGCTC GAATTCAACA AGCCGCAGCA GATCGCCCAC
ATCGCGTTCC TGCAGCAGAT GCAGAAGGAC GGCACGTTCA CGTACGCGGG CCGCAAGGAC
GAAGCGTCGG CGAAGTTCTA CAGCGGCGAC TGCGGGATCC TGACGACGTC GTCGGGTGCG
CTCGCGAACG TGCAGAAATT CGCGAAGTTC AGCTACGGCA CGGGCATGAT GCCGTACGAC
GCGAACGTGA AGGGCGCACC GCAGAACGCG ATCATCGGCG GCGCGAGCCT GTGGGTGCTG
GCCGGCAAGG ATCCGGCGAC CTACAAGGGC GTCGCGAAAT TCCTCGCGTT CCTCGCCTCG
CCGCCGGTCG CCGCGAAGTG GCACCAGGAA ACGGGCTACC TGCCGGTCAC GACGGCCGCG
TACGACCTCA CGCGCCAGCA GGGCTTCTAT GCGAAGAACC CGAGCGCGGA AACCGCGATC
AAGCAGATGT TGAACAAACC GCCGCTGCCC TACACGAAGG GGCTGCGTCT GGGCAACATG
CCGCAGATCC GCACGGTCGT CGACGAAGAG CTGGAGCAGG TCTGGGCGCA GAAGAAGTCG
CCGAAGGACG CGCTCGACTC GGCCGCCTCG CGCGGCGACG AGCTGCTGCG CCGCTTCGAG
AAGTCGGGCG GCTGA
 
Protein sequence
MKKKPAGTTI RSIALGGALM FGVQHAAFAA TEIQFWHAME SALGERVNEL ATQFNASQSD 
YKIVPVFKGT YDQALAAGIA AYRSGNAPAI LQVYEVGTAT MMKAKKAVVP VYDVFKQAGV
PLDEKAFVPT IASYYSDAKT GHLVSMPFNS STPVLYYNKD AFKKAGLDPN QPPKTWADVQ
ADAEKLRKSG MTCGFTTGWQ GWIQLENYSV WHALPFASRN NGFDGADAVL EFNKPQQIAH
IAFLQQMQKD GTFTYAGRKD EASAKFYSGD CGILTTSSGA LANVQKFAKF SYGTGMMPYD
ANVKGAPQNA IIGGASLWVL AGKDPATYKG VAKFLAFLAS PPVAAKWHQE TGYLPVTTAA
YDLTRQQGFY AKNPSAETAI KQMLNKPPLP YTKGLRLGNM PQIRTVVDEE LEQVWAQKKS
PKDALDSAAS RGDELLRRFE KSGG