Gene EcolC_0263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0263 
Symbol 
ID6067899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp301147 
End bp302463 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content53% 
IMG OID641599662 
Productglycerol-3-phosphate transporter periplasmic binding protein 
Protein accessionYP_001723269 
Protein GI170018315 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGT TACATTATAC AGCTTCAGCA CTGGCGCTCG GACTGGCGTT AATGGGGAAT 
GCACAGGCAG TGACGACCAT TCCGTTCTGG CATTCTATGG AAGGGGAACT GGGTAAAGAG
GTGGATTCTC TGGCCCAACG TTTTAACGCC GAAAATCCGG ATTACAAAAT TGTACCGACC
TATAAAGGCA ACTACGAACA GAATTTAAGC GCGGGGATTG CCGCATTTCG TACCGGCAAC
GCTCCGGCTA TTTTGCAGGT TTATGAAGTT GGCACCGCCA CCATGATGGC ATCGAAAGCC
ATTAAACCGG TATATGACGT GTTTAAAGAG GCGGGGATTC AATTCGATGA GTCGCAGTTT
GTGCCGACGG TTTCCGGTTA CTACTCCGAC AGCAAAACGG GCCACTTACT CTCCCAGCCA
TTCAACAGCT CGACCCCCGT TCTCTATTAC AACAAAGACG CCTTCAAGAA AGCAGGATTA
GACCCGGAAC AACCGCCGAA AACCTGGCAG GATCTGGCGG ACTATGCCGC GAAACTGAAA
GCCTCCGGTA TGAAGTGCGG CTACGCCAGC GGCTGGCAGG GCTGGATCCA ACTGGAAAAC
TTTAGCGCCT GGAACGGTCT GCCGTTTGCC AGCAAAAACA ACGGCTTTGA CGGCACGGAC
GCGGTGCTGG AGTTCAACAA GCCGGAGCAG GTGAAACACA TCGCCATGCT CGAGGAGATG
AACAAGAAGG GCGACTTCAG CTACGTCGGT CGTAAGGATG AATCCACCGA GAAGTTCTAT
AACGGTGATT GCGCGATGAC CACCGCCTCT TCCGGTTCTC TTGCCAACAT TCGCGAGTAC
GCCAAATTTA ACTACGGCGT AGGCATGATG CCTTACGACG CCGATGCGAA AGATGCGCCA
CAAAACGCCA TTATCGGCGG AGCCAGCCTG TGGGTGATGC AGGGTAAAGA TAAAGAAACG
TATACCGGTG TGGCGAAGTT CCTCGATTTC CTCGCGAAGC CAGAAAACGC TGCCGAGTGG
CATCAGAAAA CCGGTTATCT GCCAATCACC AAAGCAGCGT ATGACCTGAC CCGTGAGCAG
GGCTTTTATG AGAAAAACCC AGGGGCGGAT ACCGCGACGC GTCAGATGCT GAATAAGCCG
CCGTTGCCGT TCACCAAAGG GCTGCGTCTG GGCAACATGC CGCAGATCCG CGTGATTGTG
GATGAAGAGC TGGAGAGCGT GTGGACCGGT AAGAAGACAC CACAGCAGGC ACTGGATACC
GCCGTTGAGC GTGGAAATCA GTTGCTGCGC CGCTTTGAGA AATCGACGAA GTCTTAA
 
Protein sequence
MKPLHYTASA LALGLALMGN AQAVTTIPFW HSMEGELGKE VDSLAQRFNA ENPDYKIVPT 
YKGNYEQNLS AGIAAFRTGN APAILQVYEV GTATMMASKA IKPVYDVFKE AGIQFDESQF
VPTVSGYYSD SKTGHLLSQP FNSSTPVLYY NKDAFKKAGL DPEQPPKTWQ DLADYAAKLK
ASGMKCGYAS GWQGWIQLEN FSAWNGLPFA SKNNGFDGTD AVLEFNKPEQ VKHIAMLEEM
NKKGDFSYVG RKDESTEKFY NGDCAMTTAS SGSLANIREY AKFNYGVGMM PYDADAKDAP
QNAIIGGASL WVMQGKDKET YTGVAKFLDF LAKPENAAEW HQKTGYLPIT KAAYDLTREQ
GFYEKNPGAD TATRQMLNKP PLPFTKGLRL GNMPQIRVIV DEELESVWTG KKTPQQALDT
AVERGNQLLR RFEKSTKS