| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1092 |
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| Symbol | |
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| ID | 6286452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1163804 |
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| End bp | 1165120 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642624665 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_001898672 |
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| Protein GI | 187928185 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0503452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCA AGAAGATTGC GGGTGCGGCG GCAGTACTGG CCGCGTGTAC GTTTGCGCAG
GGCGCGTACG CAGTGACGGA AATCCAATGG TGGCATTCGA TGGAAGGCGC CTTGAACGAC
AAGGTGAACG AGATCGCCAC CAAGTTCAAT GCCAGCCAGT CCGATTACAA GATCGTGCCG
GTCTACAAGG GCCAATACGA TGAATCGCTG GCTGCGGGCA TTGCGGCGTT CCGCGCCGGC
AATGCACCGG CCATCCTGCA AGTGTTCGAG GTTGGTACCG CAACGATGAT GAACGCCAAG
GGCGCCATTG TGCCGGTGGC CAAGATCATG AAGGACGCCG GCGAGAAGTT CGACCCGAAG
GCCTATGTGC CGGCCGTGGC GGGCTACTAC ACGTCGAACA AGGGCGAGAT GCTGTCGTTC
CCGTTCAACA GTTCGACGAC GATCATGTAT TACAACAAGG ACGCCTTCAA GAAGGCTGGC
CTTGACCCGA ACAAGCCGCC CGCAACGTGG CAGGAAGTGG CTGTCGATGC GGCCAAGCTG
AAGGCAGCTG GTGTGCCCTG CGGTTACACG ACCGACTGGC AGTCATGGGT GCATCTGGAG
AGCTTCTCGG CGTGGCACAA CGTGTCGTTC GCGACCGAGA ACAACGGCTT TGGTGGCGCC
AAGGCCCGCT TGAACTTCAA CGGTCCGGTG CAGATCAAGC ATATCGAGAA CCTGCTCGAC
ATGCAGAAGA AGGGCTACTT CACCTACGCC GGCCGCAAGG ACGAGCCGAA GGCGAAGTTC
ATCGCGGGTG AGTGCGCCAT GCACACGGGT TCGTCGGCAG CGCTGGCGAA CATCCGCAAG
AACGCCAAGT TCAACTTCAG CCCGGCACCG CTGCCGTATG AAGCCGGCGT GCCGGGTGCC
CCGCAGAACA CGATCATCGG CGGCGCTTCG CTGTGGGTGA TGGGCGGCCA CAAGGCTGAA
GAGTACAAGG GCGTGGCGAA GTTCTTCACG TTCCTGTCGC GTCCGGAAAT GCAGGCCGAC
TGGCACCAGT CGACGGGTTA TCTGCCCGTG ACGCTGGAAG CGTATGAGCT GACCAAGAAG
TCCGGCTTCT ATGAGAAGAA CCCGGGCGCC GACGTGGCCG TCAAGCAGAT GATCGTCAAG
ACGACCGACA AGTCGCGCGG CATTCGTCTG GGCAACTTCC CGCAGATCCG TCAGGTGATC
GACGAAGAGC TGGAATCCGT CTGGGCGGGC AAGAAGACGC CGAAGGAAGC GCTGGACACG
GCAGTGTCAC GCGGCAACGA GCTGCTCGTC CGCTTCGAGA AGACCGTCAA GGAATAA
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| Protein sequence | MSIKKIAGAA AVLAACTFAQ GAYAVTEIQW WHSMEGALND KVNEIATKFN ASQSDYKIVP
VYKGQYDESL AAGIAAFRAG NAPAILQVFE VGTATMMNAK GAIVPVAKIM KDAGEKFDPK
AYVPAVAGYY TSNKGEMLSF PFNSSTTIMY YNKDAFKKAG LDPNKPPATW QEVAVDAAKL
KAAGVPCGYT TDWQSWVHLE SFSAWHNVSF ATENNGFGGA KARLNFNGPV QIKHIENLLD
MQKKGYFTYA GRKDEPKAKF IAGECAMHTG SSAALANIRK NAKFNFSPAP LPYEAGVPGA
PQNTIIGGAS LWVMGGHKAE EYKGVAKFFT FLSRPEMQAD WHQSTGYLPV TLEAYELTKK
SGFYEKNPGA DVAVKQMIVK TTDKSRGIRL GNFPQIRQVI DEELESVWAG KKTPKEALDT
AVSRGNELLV RFEKTVKE
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