Gene Tmel_0753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0753 
Symbol 
ID5298148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp794607 
End bp795920 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content35% 
IMG OID640769032 
Productextracellular solute-binding protein 
Protein accessionYP_001306001 
Protein GI150020647 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGT TTTTTATTTT TTTGCTAGTT GTTTTAAGTG TGGTAAGTTT TTCAAAGGTA 
ACCATTGAAT TTTGGCATGC TATGAGTGGT TGGAGAATAG AATTACTAGA AAATATGGCA
AAGGAGTTTA TGGCAACGCA CCCGGATATT GAGGTAAAAG TGCAGTATAC AGGTTCATAC
AGAGATACGT TTAACAAAAC GATAGCTGCG GTAAAGGCGG GAAATCCACC TCACGTTGTA
CAGATTTATG ATATTGGAAC TAGAGCAATG ATAGATGGAA ATATAGCAGT TCCGATAGGA
GATTTAATTG AGCAAGATCC AACGATAGAT CTTGGTGCAT TTTTACCACA AGTGTTGAAT
TACTACACAG TAGGCGGAAA ACTATATTCA ATGCCTTTTA ATTCTTCAAA TGCTATATTG
TTCTATAACA AAACAGCGTT TAAAGAAGCA GGGTTAGATC CTACAAAACC TCCAAGAACG
TTTGATGAAT TAATTGAATA CAGTAGAAAA TTGGTAAAGA AGGATGATAA AGGTAATATT
ATTAGATACG GTCTTACGTG GCCAACACAT TCTTGGTTCT TTGAACAGTT AATGGCTGTA
CAAGATGCGC CTCTTGTTAA CAATGACAAT GGAAGAGGGG ATAAGAGGCC AACAGAAGCA
ATTTTTAATA GTCAAGCGGG AAAAAATATT TTTGAACTTT TAACCAAAAT GACAAAGGAA
GGATTACTAA TAAACACAAA GAGGGAAGAT TGGAGTGGAG CAAGGCAAAT TTTCTTATCG
GGAAAAGCAG CAATGTTATT CTATTCAACG TCCGATGTTA AATTTATTAC CGATACAGCA
AGAGAAAATG GTTGGGAAGT AGGTACGGCA TTCCTTCCAA AACCATCCCT ATCTGTTCAA
GGTGGTGTGG TAATTGGAGG AGGTTCTCTT TGGATATTGA AGAACCATCC AAAAGAAGAA
ATAGATGCAG CTTGGAAATT TGTTAAATGG ATGACAGAAC CAAAACAACA AATAAAATGG
CATCTTGAAA CAGGTTATTT CCCTGTAAGA AAAGATGCAG TCGAACAACT TTTGTTAGAA
GGTTTTTATG CTGAAAAACC AAATTATTTA ACTGCTATTT TCCAACTTTT ACTTTCAAAA
CAAACACCTA ACACAAACGG AGCAATAATA GGTGTTTTCC CAGAGACAAG GGATATTATA
GAAACAGCAT ATGAAAAAGT TATAAATGGT GAAATGACAG TTGAAAAAGC ATTAAATTGG
GCGGCTTCAG AAGTTACAAA AGCCTTGAAA AAATACAATA GATTATATGA ATAA
 
Protein sequence
MKKFFIFLLV VLSVVSFSKV TIEFWHAMSG WRIELLENMA KEFMATHPDI EVKVQYTGSY 
RDTFNKTIAA VKAGNPPHVV QIYDIGTRAM IDGNIAVPIG DLIEQDPTID LGAFLPQVLN
YYTVGGKLYS MPFNSSNAIL FYNKTAFKEA GLDPTKPPRT FDELIEYSRK LVKKDDKGNI
IRYGLTWPTH SWFFEQLMAV QDAPLVNNDN GRGDKRPTEA IFNSQAGKNI FELLTKMTKE
GLLINTKRED WSGARQIFLS GKAAMLFYST SDVKFITDTA RENGWEVGTA FLPKPSLSVQ
GGVVIGGGSL WILKNHPKEE IDAAWKFVKW MTEPKQQIKW HLETGYFPVR KDAVEQLLLE
GFYAEKPNYL TAIFQLLLSK QTPNTNGAII GVFPETRDII ETAYEKVING EMTVEKALNW
AASEVTKALK KYNRLYE