Gene BMASAVP1_A3209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A3209 
SymbolugpB 
ID4679006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp3174103 
End bp3175428 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content66% 
IMG OID639847465 
Productglycerol-3-phosphate transporter periplasmic binding protein 
Protein accessionYP_994492 
Protein GI121600506 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0248662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACA AGATGCTGGT TCGTTCGCTC GCGTTCGGGG GCGCGCTTTG GTTCGGCGCG 
CAGCAGGCGG CGTGCGCTGC CACCGAGATC CAGTTCTGGC ATGCGATGGA GGCGGCGCTC
GGCGAGCGCG TGAACGAGAT CGCCGCGCAG TTCAATGCGT CGCAAAGCGA CTACAAGATC
GTGCCGGTCT TCAAAGGCAC CTACGATCAG GCGCTTGCGG CGGGCATCGC CGCGTACCGC
AGCGGCAACG CGCCGGCGAT CCTGCAGGTG TACGAAGTGG GCACGGCGAC GATGATGCAG
GCAAAGAAGG CGGTGCTGCC CGTATCCGAC GTGTTCCGCC AGGCGGGCGT GCCGCTCGAC
GAGAAGGCGT TCGTGCCGAC GATCGCGAGC TACTACAGCG ATGCGAGGAC GGGCCGCCTC
GTATCGATGC CGTTCAACAG CTCGACGCCC GTGCTGTACT ACAACAAGGA CGCGTTCAGG
AAGGCGGGGC TCGATCCGAA CCAGCCGCCG AAGACGTGGG CCGACGTGAA GGCCGACGCG
GAAAAGCTGA AGAAGGCGGG CTACGCGTGC GGCTACACGA CGGGCTGGCA GGGCTGGATC
CAGCTCGAGA ACTACAGCGC GTGGCATGGC CTGCCGTTCG CGACGCGCAA CAACGGCTTC
GACGGCGCCG ATGCGACGCT CGAGTTCAAC AAGCCGCAGC AGATCGCGCA CATCCAGTTC
CTGCAGGACA TGGCGAAGGA CGGCACGTTT ACGTACGTCG GCCGCAAGGA CGAGGCGAGC
GCGAAGTTCT ACAGCGGCGA TTGCGCGATC ATGACGACGT CGTCGGGCGC GCTCGCGACG
ATCCACAAGT ACGCGAAGTT CGATTTCGGC ACCGGAATGA TGCCGTACGA TGCGGGCGTG
AAGGGTGCGC CGCAGAACGC GATCATCGGC GGCGCGAGCC TGTGGGTGCT CGCGGGCAAG
GATCCGGCCA CGTACAAGGG CGTCGCGAAG TTCCTCGCCT ATCTGAGCTC GCCCGCCGTC
GCCGCGAAGT GGCACGAGGA CACGGGCTAT CTGCCGGTGA CGACGGCCGC ATACGATCTC
GCGCGCGAGC AGGGCTTCTA TGCGAAGCAC CCGGGCGCGG ACACGGCGAT CAAGCAGATG
ATGAACAAAC CGCCGCTGCC GTACACGAAG GGGCTGCGGC TCGGCAACAT GCCGCAGATC
CGCACGATCG TCGACGAGGA GCTCGAGCAG GTGTGGGCGC AGAAGAAGAC GCCGAAGGCG
GCGCTCGATT CCGCCGCCGC GCGCGGCGAC GAACTGCTGC GCCGCTTCGA GAAATCGGGC
GGCTGA
 
Protein sequence
MKYKMLVRSL AFGGALWFGA QQAACAATEI QFWHAMEAAL GERVNEIAAQ FNASQSDYKI 
VPVFKGTYDQ ALAAGIAAYR SGNAPAILQV YEVGTATMMQ AKKAVLPVSD VFRQAGVPLD
EKAFVPTIAS YYSDARTGRL VSMPFNSSTP VLYYNKDAFR KAGLDPNQPP KTWADVKADA
EKLKKAGYAC GYTTGWQGWI QLENYSAWHG LPFATRNNGF DGADATLEFN KPQQIAHIQF
LQDMAKDGTF TYVGRKDEAS AKFYSGDCAI MTTSSGALAT IHKYAKFDFG TGMMPYDAGV
KGAPQNAIIG GASLWVLAGK DPATYKGVAK FLAYLSSPAV AAKWHEDTGY LPVTTAAYDL
AREQGFYAKH PGADTAIKQM MNKPPLPYTK GLRLGNMPQI RTIVDEELEQ VWAQKKTPKA
ALDSAAARGD ELLRRFEKSG G