| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3732 |
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| Symbol | ugpB |
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| ID | 6146056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3801431 |
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| End bp | 3802747 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641618558 |
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| Product | glycerol-3-phosphate transporter periplasmic binding protein |
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| Protein accession | YP_001745698 |
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| Protein GI | 170680964 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGT TACGTTATAC AGCTTCAGCA CTGGCGCTCG GACTGGCTTT AATGGCAAAT
GCGCAGGCAG CGACGACCAT TCCGTTCTGG CATTCTATGG AAGGGGAACT GGGTAAAGAG
GTGGATTCTC TGGCCCAACG TTTTAACGCC GAAAACCCGG ATTACAAAAT TGTACCGACC
TATAAAGGCA ACTACGAACA GAATTTAAGC GCGGGGATTG CCGCATTTCG TACCGGCAAC
GCTCCGGCTA TTTTGCAGGT TTATGAAGTT GGCACCGCCA CCATGATGGC GTCGAAAGCC
ATTAAACCGG TATATGACGT GTTTAAAGAG GCGGGGATTC AGTTCGATGA GTCGCAGTTT
GTGCCGACGG TTTCAGGCTA CTACTCCGAC AGCAAAACTG GGCACTTACT CTCCCAGCCG
TTCAACAGCT CGACTCCCGT TCTCTATTAC AACAAAGACG CCTTCAAGAA AGCCGGTTTA
GACCCGGAAC AGCCGCCGAA AACCTGGCAG GATCTGGCGG ACTATGCCGC GAAACTGAAA
GCCTCCGGTA TGAAGTGCGG CTACGCCAGC GGCTGGCAGG GCTGGATCCA ACTGGAAAAC
TTTAGCGCCT GGAACGGTCT GCCGTTTGCC AGCAAAAACA ACGGCTTTGA CGGCACAGAC
GCGGTGCTGG AGTTCAACAA GCCGGAGCAG GTGAAACACA TCGCTATGCT CGAAGAGATG
AACAAGAAGG GCGATTTCAG CTACGTCGGG CGTAAGGATG AATCCACCGA GAAGTTCTAT
AACGGTGATT GCGCGATGAC GACCGCCTCT TCCGGTTCTC TTGCCAACAT TCGCGAGTAC
GCCAAATTTA ACTATGGCGT AGGCATGATG CCTTACGATG CCGATGCGAA AGACGCGCCG
CAAAACGCCA TTATCGGCGG AGCCAGTCTA TGGGTAATGC AGGGTAAAGA TAAAGAAACC
TACACCGGCG TGGCGAAGTT CCTCGACTTC CTCGCAAAGC CAGAAAACGC TGCCGAGTGG
CATCAGAAAA CCGGCTATCT GCCAATCACT AAAGCGGCGT ATGACCTGAC CCGTGAGCAG
GGCTTTTACG AGAAAAACCC AGGAGCGGAT ATTGCCACGC GTCAGATGCT GAACAAGCCA
CCGTTGCCGT TCACCAAAGG TTTGCGTCTG GGCAACATGC CGCAGATCCG CGTGATTGTG
GATGAAGAGC TGGAGAGCGT GTGGACCGGT AAGAAGACAC CACAGCAGGC GCTGGATACT
GCCGTTGAGC GTGGGAACCA GTTACTGCGC CGCTTTGAGA AATCGACGAA GTCTTAA
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| Protein sequence | MKPLRYTASA LALGLALMAN AQAATTIPFW HSMEGELGKE VDSLAQRFNA ENPDYKIVPT
YKGNYEQNLS AGIAAFRTGN APAILQVYEV GTATMMASKA IKPVYDVFKE AGIQFDESQF
VPTVSGYYSD SKTGHLLSQP FNSSTPVLYY NKDAFKKAGL DPEQPPKTWQ DLADYAAKLK
ASGMKCGYAS GWQGWIQLEN FSAWNGLPFA SKNNGFDGTD AVLEFNKPEQ VKHIAMLEEM
NKKGDFSYVG RKDESTEKFY NGDCAMTTAS SGSLANIREY AKFNYGVGMM PYDADAKDAP
QNAIIGGASL WVMQGKDKET YTGVAKFLDF LAKPENAAEW HQKTGYLPIT KAAYDLTREQ
GFYEKNPGAD IATRQMLNKP PLPFTKGLRL GNMPQIRVIV DEELESVWTG KKTPQQALDT
AVERGNQLLR RFEKSTKS
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