| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0721 |
|---|
| Symbol | |
|---|
| ID | 5757634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 769892 |
|---|
| End bp | 771205 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641301924 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001567768 |
|---|
| Protein GI | 160902187 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.540981 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAGGA CGGTTATGTT TTTATTTATG GTTTCTTTGT TAAGCGTTTT GTCTTTCCCT
GTAACCATAG AGTTTTGGCA TGCAATGAGT GGAGACAGGA TAGCTTTGAT TGAAGATATT
GTGAGTGATT TTGAAGAAGC TTATCCGGAT ATAAAAGTAA ATGCGCAATA TTCAGGAAGT
TATCCTGAGA CGTTGAATAA GCTTATTGCA GGGGTACAAT CCGGGAATGC ACCTCACATA
GTACAGATTT ACGAAATAGG TACAAGATTG ATGATAGACA GCGGTGTCAT AGTTCCTGTC
CAAGATTTAC TTGATCAAGA TGATTCTTAT GATGTAGGGG TTTTGTTGGA ACCGATATTA
AATTATTACA AAGTTGATGG GAAGTTGTAC TCCATGCCTT TCAATTCATC TACCGCTTTG
TTGTATTACA ACAAAACGCT CTTTGAAGAA GCAGGCTTAG ATCCAAATAG ACCTCCTCAA
ACTTACGAAG AACTACTGGA ATACTCCAGA ATTTTAACAA AGAAAGACTC AAGAGGAAAT
ACAGTGCAAT ACGGATTAAC TTGGCCTACC CATTCATGGA TAATTGAACA ACTTATGGCT
GCCGCTGATG CGCCACTTGT TAACAACGAT AACGGAAGAA CCGCTAGAGC GACAGAGGCT
GTTTTTAATA GTGAAGCAGG TTTAAAAATA TTTGAACTGT TTGACCAATT GAACAAAGAA
GGTTTAATTC TTAATACAGC TAGGGAAGAT TGGAATGCTG CCGGACAAAA TTTCGTTTCA
GGCAGAGCAG CTATGAATTT CTTTTCTACA TCTGATGTAA AGGTTTTTCA AGAAGGGTTA
GAAAGTAACG GCTACGAGTT AGGTACAGCC TTTTTACCTG TTCCAGATAT AAGTGTCAGT
GGAGGACCAG TTATTGGAGG AGCAAGTTTA TGGTTGATAG ATGGCCATAC AGACGAAGAA
ACCAAAGCTG CCTGGGAATT TTTGAAGTTT GTCAATCGTG AAGATCAACA GATAAGATGG
CACCAAGGTA CCGGATATTT CCCAGTTAGA AAAGATGCCA TTCAAAGGCT GCACTATGAA
GAGTTCTATG CTGAGAACCC AAATTACTTC ACTTCCTTAT TGCAACTATT GCTAGCTAAA
AGAGATTTCA ACTCCGCTGG AGCAGTTATT GGAGTGTTCC CTGAAACACG AGAGACTATA
GAAATAGCGT ATGAAAGAAT GGTTGATGGA CAAATGACAC CTGAAGAGGC ACTGAGCTGG
GCTGAAAGTA GAGTAACAGA ATTAATCCAA GAATATAACG AATTCTATCA ATAA
|
|---|
| Protein sequence | MKRTVMFLFM VSLLSVLSFP VTIEFWHAMS GDRIALIEDI VSDFEEAYPD IKVNAQYSGS
YPETLNKLIA GVQSGNAPHI VQIYEIGTRL MIDSGVIVPV QDLLDQDDSY DVGVLLEPIL
NYYKVDGKLY SMPFNSSTAL LYYNKTLFEE AGLDPNRPPQ TYEELLEYSR ILTKKDSRGN
TVQYGLTWPT HSWIIEQLMA AADAPLVNND NGRTARATEA VFNSEAGLKI FELFDQLNKE
GLILNTARED WNAAGQNFVS GRAAMNFFST SDVKVFQEGL ESNGYELGTA FLPVPDISVS
GGPVIGGASL WLIDGHTDEE TKAAWEFLKF VNREDQQIRW HQGTGYFPVR KDAIQRLHYE
EFYAENPNYF TSLLQLLLAK RDFNSAGAVI GVFPETRETI EIAYERMVDG QMTPEEALSW
AESRVTELIQ EYNEFYQ
|
|---|
| |