| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2093 |
|---|
| Symbol | |
|---|
| ID | 4627015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 2548420 |
|---|
| End bp | 2549727 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639797238 |
|---|
| Product | glycerol-3-phosphate ABC transporter extracellular solute-binding family 1 protein |
|---|
| Protein accession | YP_943440 |
|---|
| Protein GI | 119945760 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.107678 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.487826 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATTA AAAACCTCAC TGGGTTGGCG GTAGCGGCAA CGTTATTGAG TGCGCAAGTT
CATGCTAAAA CAGAGGTTGA ATGGTGGCAT GCAATGGGTG GAAATTTAGG CCAAAAAGTA
AATGAAATTG CGGCTGATTT TAATAAAAGT CAATCCGAAT ATGAAATCAA ACCCGTTTAT
AAAGGCAGCT ACGCTGAGAC AATGACCAGT GCTATCGCCG CATTTCGAGC GCAGCAGCAA
CCCGCTATTG TGCAAGTCTT TGAAGTAGGT ACCGCGACTA TGATGGGGGC AGAGCAGGCT
ATTTATCCCA TTCATGAATT GATGAAAGAG ACTAATGAGT CTTTTAATCC CAATAATTAT
TTATCCGCAG TGACCGGCTA TTACACCACC AATGACGGAA AAATGTTGTC CATGCCGTTT
AATAGTTCGA CCCCTGTTCT GTATTACAAC AAAGCAATGT TTAAAAAAGC AGGTATAAAA
TCAGCACCCA AAACATGGCA AGAGATGGAA GATGTCTCTG TTAAGTTATT AGCCTCCGGT
GCCCAATGCG GTTTTAGCAC CACATGGCAG TCCTGGACAC AAATCGAAAA CTTTGGTGCC
CGCAACAATA TTGCGCTTGC GGATAACAGC AATGGATTTG ATGGTTTAGA CACTAAGTTT
AAATTCAATA GCGCACCTTT TGTTGATCAT ATAGCACAAA TGGCTGAGTG GTCAAAATCT
GGAATCTTTA AATACGGTGG CCGTCAATCA AAAGGTATGC CGTTGTTTTA CACGCAGGAA
TGTGCAATGA CCATGGGCTC ATCTGCAGGG CTTGCCGGTA TTCAAGAAAA TATGAAAGAT
ATTGACGTGG GTGTTGCCGA GCTTCCTTTT GATGACACGC TTATTTCAAC ACCACAAAAC
ACTATTATTG GCGGCGCTTC ATTATGGGTG TTACGTGGAC ATTCAGACGA GCAATATAAA
GGAGTGGCTG AATTCTTTAC TTACCTGTCA AGTCCGAAGG TGCAAGCAGA TTGGCATCAG
TTTACCGGAT ATTTACCTAT TACTAAACAG GCGCACGCGC TAACGAAAAA GCAGGGATTC
TATAAAACGC ATCCTGGTAC TGAGACAGCC GTTATTCAAA TGACGTCAAC CAAGCCTACC
GTTAATTCCA AGGGAATTCG TTTTGGCAAC TTTCTGCAAA CACGTGACAT TATCAACGAA
GAGTTAGAAT CAGTCTGGTC TGGCGATCAA TCGGCTCAAG TCGCACTGAA TAATGCTGTG
CGTCTTGGTA ATGAGCAGTT GAGACGCTTC GAACGTACTC AACAGTAG
|
|---|
| Protein sequence | MSIKNLTGLA VAATLLSAQV HAKTEVEWWH AMGGNLGQKV NEIAADFNKS QSEYEIKPVY
KGSYAETMTS AIAAFRAQQQ PAIVQVFEVG TATMMGAEQA IYPIHELMKE TNESFNPNNY
LSAVTGYYTT NDGKMLSMPF NSSTPVLYYN KAMFKKAGIK SAPKTWQEME DVSVKLLASG
AQCGFSTTWQ SWTQIENFGA RNNIALADNS NGFDGLDTKF KFNSAPFVDH IAQMAEWSKS
GIFKYGGRQS KGMPLFYTQE CAMTMGSSAG LAGIQENMKD IDVGVAELPF DDTLISTPQN
TIIGGASLWV LRGHSDEQYK GVAEFFTYLS SPKVQADWHQ FTGYLPITKQ AHALTKKQGF
YKTHPGTETA VIQMTSTKPT VNSKGIRFGN FLQTRDIINE ELESVWSGDQ SAQVALNNAV
RLGNEQLRRF ERTQQ
|
|---|
| |