| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1185 |
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| Symbol | |
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| ID | 8018829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1255032 |
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| End bp | 1256348 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644829967 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002981149 |
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| Protein GI | 241662789 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.276437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCA AGAAGATTGC GGGGGCGGCG GCAGTACTGG CCGCGTGTAC GTTTGCGCAA
GGCGCGTACG CAGTGACGGA AATCCAATGG TGGCATTCGA TGGAAGGCGC CTTGAACGAC
AAGGTGAATG AGATCGCCAC CAAGTTCAAC GCTAGCCAGT CCGACTACAA GATCGTGCCG
GTCTACAAGG GCCAATACGA TGAATCGCTG GCCGCCGGCA TCGCGGCCTT CCGCGCCGGC
AATGCACCGG CCATCCTGCA AGTCTTCGAA GTCGGTACCG CAACGATGAT GAACGCCAAG
GGCGCCATCG TGCCGGTAGC CAAGATCATG AAGGACGCTG GCGAGAAGTT TGACCCGAAG
GCCTATGTGC CGGCCGTGGC GGGTTACTAC ACGTCGAACA AGGGCGAGAT GCTGTCTTTC
CCGTTCAACA GCTCGACGAC GATCATGTAT TACAACAAGG ACGCCTTCAA GAAGGCTGGC
CTTGACCCGA ACAAGCCGCC CGCAACGTGG CAGGAAGTGG CTGTCGACGC GGCCAAGCTG
AAGGCGGCTG GCGTGCCCTG CGGTTACACG ACCGACTGGC AGTCGTGGGT GCATCTGGAG
AGCTTCTCGG CATGGCACAA CGTGTCGTTC GCGACCGAGA ACAACGGTTT TGGCGGGGCC
AAGGCCCGCT TGAACTTCAA CGGCCCGGTG CAGATCAAGC ACATCGAGAA CCTGCTCGAC
ATGCAGAAGA AGGGCTACTT CACATACGCC GGCCGCAAGG ACGAGCCGAA GGCGAAGTTC
ATCGCAGGTG AGTGCGCCAT GCACACGGGT TCGTCGGCAG CGCTGGCGAA TATCCGCAAG
AACGCCAAGT TCAACTTCAG CCCGGCACCG CTGCCGTATG AAGCCGGCGT GCCGGGTGCC
CCGCAGAACA CGATCATCGG CGGCGCTTCG CTGTGGGTGA TGGGCGGCCA CAAGGCCGAG
GAGTACAAGG GCGTGGCGAA GTTCTTCTCG TTCCTGTCGC GTCCGGAAAT GCAGGCCGAC
TGGCACCAGT CGACGGGTTA TCTGCCCGTG ACGCTGGAAG CGTATGAGCT GACCAAGAAG
TCCGGTTTCT ATGAGAAGAA CCCGGGCGCC GACGTGGCCG TCAAGCAGAT GATCGTCAAG
ACGACCGACA AGTCGCGCGG TATCCGTCTG GGCAACTTCC CGCAGATCCG TCAGGTGATC
GACGAAGAGC TGGAATCCGT CTGGGCCGGC AAGAAGGCGC CGAAGGAGGC GCTGGACACG
GCAGTGTCAC GCGGCAACGA GCTGCTCGTC CGCTTCGAGA AGACCGTCAA GGAATAA
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| Protein sequence | MSIKKIAGAA AVLAACTFAQ GAYAVTEIQW WHSMEGALND KVNEIATKFN ASQSDYKIVP
VYKGQYDESL AAGIAAFRAG NAPAILQVFE VGTATMMNAK GAIVPVAKIM KDAGEKFDPK
AYVPAVAGYY TSNKGEMLSF PFNSSTTIMY YNKDAFKKAG LDPNKPPATW QEVAVDAAKL
KAAGVPCGYT TDWQSWVHLE SFSAWHNVSF ATENNGFGGA KARLNFNGPV QIKHIENLLD
MQKKGYFTYA GRKDEPKAKF IAGECAMHTG SSAALANIRK NAKFNFSPAP LPYEAGVPGA
PQNTIIGGAS LWVMGGHKAE EYKGVAKFFS FLSRPEMQAD WHQSTGYLPV TLEAYELTKK
SGFYEKNPGA DVAVKQMIVK TTDKSRGIRL GNFPQIRQVI DEELESVWAG KKAPKEALDT
AVSRGNELLV RFEKTVKE
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