More than 300 homologs were found in PanDaTox collection
for query gene Bcav_2846 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_2846  extracellular solute-binding protein family 1  100 
 
 
435 aa  877    Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.687638 
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  49.26 
 
 
431 aa  405  1e-111  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  46.04 
 
 
431 aa  385  1e-106  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  45.54 
 
 
431 aa  382  1e-105  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  47.28 
 
 
431 aa  378  1e-104  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  45.66 
 
 
431 aa  377  1e-103  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  45.91 
 
 
425 aa  368  1e-100  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  30.91 
 
 
441 aa  205  1e-51  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  32.67 
 
 
452 aa  202  9.999999999999999e-51  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  31.52 
 
 
440 aa  187  4e-46  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  31.77 
 
 
435 aa  186  6e-46  Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_012917  PC1_0631  extracellular solute-binding protein family 1  29.66 
 
 
435 aa  168  2e-40  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0845  extracellular solute-binding protein family 1  29.79 
 
 
435 aa  165  1.0000000000000001e-39  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  26.91 
 
 
445 aa  155  1e-36  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  30.1 
 
 
448 aa  150  4e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  29.22 
 
 
444 aa  144  4e-33  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  27.17 
 
 
462 aa  144  4e-33  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  28.72 
 
 
444 aa  143  6e-33  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  28.24 
 
 
436 aa  140  4.999999999999999e-32  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_010465  YPK_3962  glycerol-3-phosphate transporter periplasmic binding protein  30.37 
 
 
439 aa  140  6e-32  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0256  glycerol-3-phosphate transporter periplasmic binding protein  30.37 
 
 
439 aa  140  6e-32  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3655  glycerol-3-phosphate transporter periplasmic binding protein  30.37 
 
 
439 aa  140  6e-32  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3861  glycerol-3-phosphate transporter periplasmic binding protein  29.66 
 
 
439 aa  137  3.0000000000000003e-31  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4045  glycerol-3-phosphate transporter periplasmic binding protein  29.66 
 
 
439 aa  137  4e-31  Dickeya zeae Ech1591  Bacteria  normal  0.661181  n/a   
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  30.03 
 
 
438 aa  137  4e-31  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  30.03 
 
 
438 aa  137  4e-31  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  30.03 
 
 
438 aa  137  4e-31  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  30.03 
 
 
438 aa  137  5e-31  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  27.53 
 
 
439 aa  136  6.0000000000000005e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  29.38 
 
 
440 aa  135  9.999999999999999e-31  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  26.11 
 
 
458 aa  135  9.999999999999999e-31  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  25.8 
 
 
458 aa  134  3e-30  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.86 
 
 
458 aa  134  3e-30  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  29.75 
 
 
438 aa  134  3e-30  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  25.86 
 
 
458 aa  134  3.9999999999999996e-30  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.86 
 
 
458 aa  134  3.9999999999999996e-30  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.86 
 
 
458 aa  134  3.9999999999999996e-30  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  25.86 
 
 
458 aa  134  3.9999999999999996e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.55 
 
 
458 aa  133  6.999999999999999e-30  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  24.88 
 
 
437 aa  131  2.0000000000000002e-29  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  25.82 
 
 
437 aa  130  3e-29  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_013202  Hmuk_0332  extracellular solute-binding protein family 1  27.55 
 
 
468 aa  130  6e-29  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_010498  EcSMS35_3732  glycerol-3-phosphate transporter periplasmic binding protein  28.33 
 
 
438 aa  130  6e-29  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1508  extracellular solute-binding protein family 1  30.84 
 
 
451 aa  129  7.000000000000001e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.55774  normal 
 
 
-
 
NC_010658  SbBS512_E3870  glycerol-3-phosphate transporter periplasmic binding protein  28.9 
 
 
438 aa  129  1.0000000000000001e-28  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03302  glycerol-3-phosphate transporter subunit  28.33 
 
 
438 aa  128  2.0000000000000002e-28  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0262  extracellular solute-binding protein family 1  28.33 
 
 
438 aa  128  2.0000000000000002e-28  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_0263  glycerol-3-phosphate transporter periplasmic binding protein  28.33 
 
 
438 aa  128  2.0000000000000002e-28  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_03255  hypothetical protein  28.33 
 
 
438 aa  128  2.0000000000000002e-28  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3650  glycerol-3-phosphate transporter periplasmic binding protein  28.33 
 
 
438 aa  128  2.0000000000000002e-28  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4767  glycerol-3-phosphate transporter periplasmic binding protein  28.33 
 
 
438 aa  128  2.0000000000000002e-28  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.552805 
 
 
-
 
NC_007347  Reut_A2052  extracellular solute-binding protein  28.21 
 
 
438 aa  127  3e-28  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  26.62 
 
 
441 aa  127  3e-28  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  28.61 
 
 
439 aa  127  3e-28  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_009801  EcE24377A_3931  glycerol-3-phosphate transporter periplasmic binding protein  28.05 
 
 
438 aa  127  4.0000000000000003e-28  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1185  extracellular solute-binding protein family 1  27.4 
 
 
438 aa  126  6e-28  Ralstonia pickettii 12D  Bacteria  normal  0.276437  normal 
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.12 
 
 
458 aa  126  7e-28  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2075  extracellular solute-binding protein  27.87 
 
 
433 aa  126  7e-28  Jannaschia sp. CCS1  Bacteria  normal  0.114781  normal  0.235936 
 
 
-
 
NC_010682  Rpic_1092  extracellular solute-binding protein family 1  27.4 
 
 
438 aa  126  7e-28  Ralstonia pickettii 12J  Bacteria  normal  0.0503452  normal 
 
 
-
 
NC_013421  Pecwa_2173  extracellular solute-binding protein family 1  29.89 
 
 
445 aa  125  2e-27  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00822083  n/a   
 
 
-
 
NC_012917  PC1_1881  extracellular solute-binding protein family 1  30.03 
 
 
445 aa  124  3e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000340671  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  26 
 
 
458 aa  124  3e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2195  extracellular solute-binding protein family 1  25.56 
 
 
450 aa  124  3e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1264  glycerol-3-phosphate-binding periplasmic lipoprotein signal peptide  27.4 
 
 
438 aa  122  1.9999999999999998e-26  Ralstonia solanacearum GMI1000  Bacteria  normal  0.400828  normal  0.517414 
 
 
-
 
NC_007963  Csal_2738  extracellular solute-binding protein  28.39 
 
 
438 aa  120  3.9999999999999996e-26  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.345118  n/a   
 
 
-
 
NC_008541  Arth_2948  extracellular solute-binding protein  31.39 
 
 
448 aa  120  3.9999999999999996e-26  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  25.95 
 
 
437 aa  119  7.999999999999999e-26  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_011886  Achl_2663  extracellular solute-binding protein family 1  29.19 
 
 
468 aa  119  9e-26  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009767  Rcas_0113  extracellular solute-binding protein  27.91 
 
 
455 aa  119  9.999999999999999e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.270734  normal 
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  25 
 
 
437 aa  117  3e-25  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  23.95 
 
 
461 aa  116  7.999999999999999e-25  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  25.53 
 
 
435 aa  116  7.999999999999999e-25  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4566  extracellular solute-binding protein  26.56 
 
 
453 aa  115  1.0000000000000001e-24  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I3021  glycerol-3-phosphate transporter periplasmic binding protein  27.95 
 
 
441 aa  115  2.0000000000000002e-24  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  28.45 
 
 
441 aa  114  3e-24  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2744  glycerol-3-phosphate transporter periplasmic binding protein  28.45 
 
 
441 aa  114  4.0000000000000004e-24  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3726  glycerol-3-phosphate transporter periplasmic binding protein  28.45 
 
 
441 aa  114  4.0000000000000004e-24  Burkholderia pseudomallei 1710b  Bacteria  normal  0.268589  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3209  glycerol-3-phosphate transporter periplasmic binding protein  28.45 
 
 
441 aa  114  4.0000000000000004e-24  Burkholderia mallei SAVP1  Bacteria  normal  0.0248662  n/a   
 
 
-
 
NC_008836  BMA10229_A1760  glycerol-3-phosphate transporter periplasmic binding protein  28.45 
 
 
441 aa  114  4.0000000000000004e-24  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2794  glycerol-3-phosphate transporter periplasmic binding protein  28.45 
 
 
441 aa  114  4.0000000000000004e-24  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0374  glycerol-3-phosphate transporter periplasmic binding protein  28.57 
 
 
444 aa  113  6e-24  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2712  glycerol-3-phosphate transporter periplasmic binding protein  28.57 
 
 
443 aa  113  6e-24  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.290307  n/a   
 
 
-
 
NC_008542  Bcen2424_0395  glycerol-3-phosphate transporter periplasmic binding protein  28.57 
 
 
443 aa  113  6e-24  Burkholderia cenocepacia HI2424  Bacteria  normal  0.954301  n/a   
 
 
-
 
NC_007973  Rmet_2055  extracellular solute-binding protein  25.85 
 
 
436 aa  112  1.0000000000000001e-23  Cupriavidus metallidurans CH34  Bacteria  normal  0.822621  normal 
 
 
-
 
NC_009485  BBta_0714  ABC transporter substrate-binding protein  25.06 
 
 
429 aa  112  1.0000000000000001e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  25.06 
 
 
466 aa  110  4.0000000000000004e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_3755  glycerol-3-phosphate transporter periplasmic binding protein  28.16 
 
 
441 aa  110  4.0000000000000004e-23  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_00790  ABC-type sugar transport system, periplasmic component  28.81 
 
 
437 aa  110  5e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.312494  normal  0.191801 
 
 
-
 
NC_010084  Bmul_0298  glycerol-3-phosphate transporter periplasmic binding protein  27.71 
 
 
444 aa  110  6e-23  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1527  extracellular solute-binding protein family 1  29.07 
 
 
465 aa  110  7.000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.922727  normal  0.377984 
 
 
-
 
NC_007510  Bcep18194_A3492  glycerol-3-phosphate transporter periplasmic binding protein  27.43 
 
 
444 aa  109  8.000000000000001e-23  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  23.33 
 
 
423 aa  109  1e-22  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010551  BamMC406_0323  glycerol-3-phosphate transporter periplasmic binding protein  27.43 
 
 
444 aa  108  1e-22  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.839712 
 
 
-
 
NC_010681  Bphyt_3509  glycerol-3-phosphate transporter periplasmic binding protein  26.22 
 
 
441 aa  108  2e-22  Burkholderia phytofirmans PsJN  Bacteria  normal  0.839022  normal  0.0272066 
 
 
-
 
NC_013947  Snas_0203  extracellular solute-binding protein family 1  27.89 
 
 
441 aa  108  2e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.346278  normal  0.123927 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  26.54 
 
 
407 aa  108  2e-22  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A1155  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  25.37 
 
 
434 aa  108  2e-22  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2709  glycerol-3-phosphate transporter periplasmic binding protein  27.73 
 
 
441 aa  108  2e-22  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0297  extracellular solute-binding protein family 1  29.61 
 
 
453 aa  108  2e-22  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0248346 
 
 
-
 
NC_011884  Cyan7425_3276  extracellular solute-binding protein family 1  25.44 
 
 
420 aa  107  3e-22  Cyanothece sp. PCC 7425  Bacteria  normal  0.147153  normal  0.336546 
 
 
-
 
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