Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3686 |
Symbol | |
ID | 4030672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 4057570 |
End bp | 4058952 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637972098 |
Product | extracellular solute-binding protein |
Protein accession | YP_578874 |
Protein GI | 92119145 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCGG GGCAGCCCCG GCCCCGCCGT GTGCGGAGGG CAAGGCACGA TGCGAACACC GGCATGGAGA CTGGCGCTGC TGTTCTGCGC GGTGCAATTC ACTGCCGCAC TGCCGCACTG CCGGCTCCGG CACGCGCCGT CACCGAGATC GCGTGGTGGC ACGCGATGTC CGGCGAACTC GGCCGGCGGC TCGGACGGCT CGCCACCGAA TTCAACGGGT CTCAATCCGA GTACCGGATC GTGCCGACCT ACAAGGGCAA CTACACCGAG ACGGTGACCG CGGCGATCTT CGCGTTCCGC TCGCGGAGCC AGCCGGCGAT CGTGCAGGTC AACGAAATCG CCACCGGCAC CATGATGGCG GCTCAGGGGG CGATCTATCC GGTCTTCGAG CTGATGCGCG ACGAGGACGA AGCGTTTTCC CCGGCGGCCT ATCTTCCGGC CATCACGGGA TACTATGCCG ATGTCGCGGG CAACCTGCTG TCGTTCCCGT TCAATGTCTC GACCCCCATC CTCTATTACA ACAAGGACCT GTTCCGCACC GCCGGTCTTG ATCCCGAGAG GCCGCCGAAG ACCTGGCCGG AGGTCGGCGA AGCCGCGAAG AGGCTGCGCG AGGCCGGGGT CGCTTGCGGC TTCACCACGT CGTGGCCGTC ATGGGTCAAT GTCGAGAGTT TTCTCGCCTT GCACAATCTG CCGATCGCAA CGCGCGCCAA CGGGTTCGGC GGGCTCGACG CCGTCCTCAT TTTCAACAAT CCACTGATGG TCCGCCACGT TGCCCAACTC GCCGAATGGC AGAAGACCGG AATTTTCGAC TATAGCGGCC GGGGAACGGC TGCCGAGCCT CGTTTCCAGC ATGGCGAATG CGGCATCTTC ATGGGCTCTT CGGCGACCCG CGCGGATATC ATCGCCAATT CCAAATTCGC CGTCGGCCAA GGCATGCTGC CGTTTTGGCC GGATGTCGAA GGCGCGCCGC AGAACACCAT CATCGGCGGC GCCACATTAT GGGTGCTGCG CGATCGCCCG CGCGAGGAAT ACAAGGGCGT CGCAAAATTC TTTGCCTATC TGTCGAAGCC CGAAGTACAG GCAGCCTGGC ACCAGCACAC CGGCTACCTG CCGATTACCC GCGCGGCATT CGATCTCACC CGCGCGCAGG GCTTTTACGA TCGCAATCCG GGGTCCGCGA TCGCGATCGA ACAGATGACG CTGAAGCCGC CGACCGAGAA TTCAAGGGGG TTGCGGCTCG GGTCGTTCGT TCTGATCCGC GCCGTCATCG AGGACGAACT CGAACAGGCC TTCAGCGGCA AGAAGAGCGC GCAGGCCGCG ATGGATTCGG CGGTGGCGCG CGGCAACAAG CTGCTGCGCC AGTTTGAGCG CACCAATCCG TGA
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Protein sequence | MTAGQPRPRR VRRARHDANT GMETGAAVLR GAIHCRTAAL PAPARAVTEI AWWHAMSGEL GRRLGRLATE FNGSQSEYRI VPTYKGNYTE TVTAAIFAFR SRSQPAIVQV NEIATGTMMA AQGAIYPVFE LMRDEDEAFS PAAYLPAITG YYADVAGNLL SFPFNVSTPI LYYNKDLFRT AGLDPERPPK TWPEVGEAAK RLREAGVACG FTTSWPSWVN VESFLALHNL PIATRANGFG GLDAVLIFNN PLMVRHVAQL AEWQKTGIFD YSGRGTAAEP RFQHGECGIF MGSSATRADI IANSKFAVGQ GMLPFWPDVE GAPQNTIIGG ATLWVLRDRP REEYKGVAKF FAYLSKPEVQ AAWHQHTGYL PITRAAFDLT RAQGFYDRNP GSAIAIEQMT LKPPTENSRG LRLGSFVLIR AVIEDELEQA FSGKKSAQAA MDSAVARGNK LLRQFERTNP
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