| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1881 |
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| Symbol | |
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| ID | 8132824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2172371 |
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| End bp | 2173708 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644865170 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003017458 |
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| Protein GI | 253688268 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000340671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATTC GGTTTAGGTT CACGTCCGTT TTTCTGATGC TGTTAAATAT GGTCTTGCTC
GTCCCGCTGT CTGCCAGGGC AGCCGTTGAA CTGACGTTTT GGCATGGCAT GGACAGCAAT
CTGAACACGG AATTGATACG GTTGGTCAAC CGATTTAACG AATCTCAGAC CCTGTACCAT
GTTGAACCCA TCTATAAGGG CAGCTATGAA CAGACGCTTG CCGCGGGTAT TGCCGCTTAT
CGCACCGGTA ACGCCCCGGA TATTTTGCAG GTTTATGATG TTGGTACGCC GAATATGATA
CACAGCGGGG CGATTATCCC GGTGTTCGAC CTGTTCAAAC AGGTGGGTAT CGATAATGAC
GAAAAAGCCT TTCTGCCCGC AGTGGCGCTG TTTTACAGCG ACAGCCAGAC CGGACATCTG
ATTTCCCAGC CGTTTAACAG TTCAACGCCC GTTCTTTACT ACAACAAAGA TGCGTTTATT
AAGGCTGGAC TCGATCCTGA TAAGCCACCG CGAACCTGGA ATGAGTTGGA GTACGATGCG
GCGCGATTGC GTCAGAGTGG GATGACGTGC GGCTACACGA ATGCGGGGCA GCAGGGCTGG
ATATTACTGG AAGCGTTTAG CGTGTGGAAC GGGCTGCCGA TCGCAACGAA AAACAATGGT
TTCGACGGTG TCGATGCGCA TCTGTTGGTG AACGGTCCGT TGCAGGTCGC ACACATTACT
CAGCTTGCGG AGATGATGAA AAAGAACGAA TTCAGCTATT TCGGCCGCAA TGATGAGGGT
ACTGCGCGCT TTTATAACGG CGACTGCGGC ATCTTGACCA CCTCGTCGGG CGGGCTACGC
AAGATTCAGA ACTATGCCAA ATTTCACTAC GGTGTAGGCA TGCTGCCCTA CAGTGAAGAA
GTTAAAGGCG CGCCACAGAA TACGTTTATC GGCGGAGCAA GCCTTTGGGT CATGAAAGGG
AAAGCAACCT CGCATTATCA AGGTATTGCT GAATTCCTGC ATTTCCTGAC GCTGCCGGAA
AATGCGGCCG AATGGCATCA GATGACGGGC TATCTGCCGG TGACACAACC CGCTTACGAA
CTCACGCGCG AGCAGGGGTT TTATGTCAGA TACCCCGGCA GCGATGTTGC TATGAAACAG
CTTACCAATA AACCGCCACT GCCTTATACG CGCGGGTTCC GCTTGGGCAA TATGCCGCAA
ATTCGCACCA TCATGGATGA AGAGCTGGAG AAAGTCTGGG CAGAACAGGA AACGCCACAA
CAGGCGCTGG ACAATGTGGT TTCGCGGGGC GATCTCCTGT TGCAGCATTT CGCGCAGTCG
GTTTCCCGTC ATTCGTGA
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| Protein sequence | MTIRFRFTSV FLMLLNMVLL VPLSARAAVE LTFWHGMDSN LNTELIRLVN RFNESQTLYH
VEPIYKGSYE QTLAAGIAAY RTGNAPDILQ VYDVGTPNMI HSGAIIPVFD LFKQVGIDND
EKAFLPAVAL FYSDSQTGHL ISQPFNSSTP VLYYNKDAFI KAGLDPDKPP RTWNELEYDA
ARLRQSGMTC GYTNAGQQGW ILLEAFSVWN GLPIATKNNG FDGVDAHLLV NGPLQVAHIT
QLAEMMKKNE FSYFGRNDEG TARFYNGDCG ILTTSSGGLR KIQNYAKFHY GVGMLPYSEE
VKGAPQNTFI GGASLWVMKG KATSHYQGIA EFLHFLTLPE NAAEWHQMTG YLPVTQPAYE
LTREQGFYVR YPGSDVAMKQ LTNKPPLPYT RGFRLGNMPQ IRTIMDEELE KVWAEQETPQ
QALDNVVSRG DLLLQHFAQS VSRHS
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