Gene Spro_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0234 
Symbol 
ID5606422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp263403 
End bp264722 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content57% 
IMG OID640935725 
Productglycerol-3-phosphate transporter periplasmic binding protein 
Protein accessionYP_001476472 
Protein GI157368483 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.500336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCT ACGCTATTCG CAAAACTACG CTGTGCGTCG CGTTGACCCT GGCGGTCAGC 
ACTCAGGCAC TGGCGGCAAC CGAGATCCCG TTCTGGCATT CAATGGAAGG TGAATTGGGT
AAAGAAGTGG ATTCCCTGGC GGATCGCTTT AACCAGTCGC ACACCGACGT CAAAATTGTC
CCGGTTTATA AAGGTAACTA CGAACAGAGC CTGGCGGCGG GCATTGCGGC CTATCGCTCC
GGCAAAGCGC CGGCAATCTT GCAGGTGTAC GAGGTGGGCA CGGCAACCAT GATGGCCAGC
AAGGCGATCA AGCCGGTGTA TGAAGTGTTT AAAGATGCCG GTATCAACTT TGACGAGTCG
GTGTTCGTGC CGACGGTGGC CGGTTACTAC ACCGACAACA AGAGCGGCCA TCTGCTGTCT
CAGCCGTTCA ACAGTTCCAC TCCAGTGCTG TATTACAACA AGGACGCCTT CAAAAAAGCC
GGCCTGAACC CGGACCAGCC GCCAAAAACC TGGCAGGAAC TGGCGGCGGA TACCGCCAAA
CTGCGTGCAG CCGGTATGAA GTGTGGCTAC GCCAGCGGCT GGCAGGGCTG GATCCAGCTC
GAGAACTTCA GCGCCTGGCA CGGGGTACCG TTCGCCACGG AGAACAACGG TTTCGGGGGA
GCCAGCGCCA AGCTGGAGTT CAACAAGCCG CTGCAGGTCA AGCACATCCA ACTGCTGGAA
GAGATGAACA AGAAGGGTAA TTTCACCTAT TTCGGCCGTA AAGACGAATC CACCGAGAAG
TTCTATAGCG GTGATTGCGC CATTACTACT GCGTCATCCG GCTCTCTGGC GGATATCAAG
CATTACGCCA AGTTCAACTA CGGCGTGGGC ATGATGCCGT ACGATGCGGA TGCCAAAAAT
GCACCGCAGA ACGCCATCAT TGGCGGTGCC AGCCTGTGGG TGATGAACGG CAAAGATGCC
GCCACTTACA AAGGGGTTGC CGAGTTCCTG CAGTATCTGG CCCAGCCGGA AATCGCCGCC
GAATGGCACC AGAAGACCGG TTATCTGCCG ATCACCACCG CGGCTTACGA TCTGACCAAG
CAACAGGGCT TCTATGACAA GAACCCGGGC GCCGATGTGG CAACGCGTCA GATGCTGAAC
AAGCCGCCAT TACCATTCAC CAAGGGCCTG CGTTTGGGCA ACATGCCGCA GATCCGTACC
GTGGTGGATG AAGAATTGGA AGGCGTGTGG ACCGGCAAGA AAACGCCACA ACAGGCGCTG
GATGCCGCCG TGCAGCGCGG TGACGTATTG CTGCGTCGCT TCGAGTCCCA GACCAAGTAG
 
Protein sequence
MLTYAIRKTT LCVALTLAVS TQALAATEIP FWHSMEGELG KEVDSLADRF NQSHTDVKIV 
PVYKGNYEQS LAAGIAAYRS GKAPAILQVY EVGTATMMAS KAIKPVYEVF KDAGINFDES
VFVPTVAGYY TDNKSGHLLS QPFNSSTPVL YYNKDAFKKA GLNPDQPPKT WQELAADTAK
LRAAGMKCGY ASGWQGWIQL ENFSAWHGVP FATENNGFGG ASAKLEFNKP LQVKHIQLLE
EMNKKGNFTY FGRKDESTEK FYSGDCAITT ASSGSLADIK HYAKFNYGVG MMPYDADAKN
APQNAIIGGA SLWVMNGKDA ATYKGVAEFL QYLAQPEIAA EWHQKTGYLP ITTAAYDLTK
QQGFYDKNPG ADVATRQMLN KPPLPFTKGL RLGNMPQIRT VVDEELEGVW TGKKTPQQAL
DAAVQRGDVL LRRFESQTK