| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2055 |
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| Symbol | |
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| ID | 4038862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2226265 |
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| End bp | 2227575 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637977440 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_584203 |
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| Protein GI | 94310993 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.822621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTTC CACGCACCGC GTTGAAGTTC GCCGCCGTTG CAAGCCTGGC CTTGGCCGGT
ACGGCCCATG CCGCAGTTGA GATCCAGTGG TGGCACGCCA TGCAGGGCGC GCTGAACGAC
AAGGTCAACG AGATTGCCGA CAAGTTCAAC GCCAGCCAGT CCGACTACAA GATCGTGCCG
GTCAACAAGG GCAATTACGA CGAGACCATG GCAGCCGGCA TTGCGGCATT CCGCGCGGGC
GGCGCGCCGG CCATCCTGCA GGTATTCGAG GTGGGTACCG CGACGATGAT GAGCGCCAAG
GGCGCCATCA AGCCGGTGTC GCAGGTGATG AAGGACGCTG GCGAGAAGTT CGATCAAAAG
GCGTACATCC CGGCAGTGGC GGGTTACTAC ACGTCGTCGA AGGGCGAGAT GCTGTCGTTC
CCCTTCAATA GCTCGACGAC TGTCTTCTAT TACAACAAGG ATGCCTTCAA GAAGGCGGGC
ATTTCCGCTC CACCCAAGAC CTGGCCCGAG GTGATGCAGT ACTCGGCCAA GCTCAAGGCG
TCGGGCCAGA ACTGCGCCTA TACCACCGAC TGGCAGAGCT GGGTGCACCT GGAGAGCTTC
TCCGCCTGGC ACAACACGCT CTTCGCCACG AAGAACAACG GTTTTGGCGG CACCGACGCG
CGACTGGTCT TCAATAGCCC GCTGCATGTG AAGCACATCA CGAATCTGCA GGAGATGGTG
AAGAAGGGCT ACTTCAGCTA CGGCGGCCGC AAGGCGGAGT CGCAGGCCAA GTTCTACAAC
GGCGAGTGCG CGATGTTCAC GGGCTCGTCC GCATCGCTGG CCAATATCCG CAAGAATGCC
AAATTCCAGT TTGGTGTGTC GCAACTGCCG TACTACCCGG ACGTGCCGGG CGCGCCGCAG
AACACGATCA TCGGCGGTGC ATCGCTGTGG GTGATGGGCG GCAAGAAGGC CGACGAGTAC
AAGGGCGTGG CCAAGTTCTT CACGTTCCTG TCGCGACCGG AGATCCAGTC GGACTGGCAC
CAGGCCACTG GCTACCTGCC GGTGACGATG GCTGCGTATG AGATGACGAG GAAGTCGGGT
TACTACGACA AGAACCCGGG TGCCGATGTC TCGGTCGAGC AGATGGTCGT GAAGACCACC
GACAAGTCGC GCGGCGTGCG TCTCGGCAAC CTCGTGCAGA TCCGTACCGT GATCGACGAG
GAACTCGAAG CGGTGTGGGC TGGCAAGAAG GAGCCGAAGG CCGCGCTCGA CAACGCCGTG
GCACGTGGCA ACGAACTGCT GGAGCGTTTC CAGAAGACCG CCAGGGAATA A
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| Protein sequence | MSFPRTALKF AAVASLALAG TAHAAVEIQW WHAMQGALND KVNEIADKFN ASQSDYKIVP
VNKGNYDETM AAGIAAFRAG GAPAILQVFE VGTATMMSAK GAIKPVSQVM KDAGEKFDQK
AYIPAVAGYY TSSKGEMLSF PFNSSTTVFY YNKDAFKKAG ISAPPKTWPE VMQYSAKLKA
SGQNCAYTTD WQSWVHLESF SAWHNTLFAT KNNGFGGTDA RLVFNSPLHV KHITNLQEMV
KKGYFSYGGR KAESQAKFYN GECAMFTGSS ASLANIRKNA KFQFGVSQLP YYPDVPGAPQ
NTIIGGASLW VMGGKKADEY KGVAKFFTFL SRPEIQSDWH QATGYLPVTM AAYEMTRKSG
YYDKNPGADV SVEQMVVKTT DKSRGVRLGN LVQIRTVIDE ELEAVWAGKK EPKAALDNAV
ARGNELLERF QKTARE
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