Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2055 |
Symbol | |
ID | 4038862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2226265 |
End bp | 2227575 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637977440 |
Product | extracellular solute-binding protein |
Protein accession | YP_584203 |
Protein GI | 94310993 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.822621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTTC CACGCACCGC GTTGAAGTTC GCCGCCGTTG CAAGCCTGGC CTTGGCCGGT ACGGCCCATG CCGCAGTTGA GATCCAGTGG TGGCACGCCA TGCAGGGCGC GCTGAACGAC AAGGTCAACG AGATTGCCGA CAAGTTCAAC GCCAGCCAGT CCGACTACAA GATCGTGCCG GTCAACAAGG GCAATTACGA CGAGACCATG GCAGCCGGCA TTGCGGCATT CCGCGCGGGC GGCGCGCCGG CCATCCTGCA GGTATTCGAG GTGGGTACCG CGACGATGAT GAGCGCCAAG GGCGCCATCA AGCCGGTGTC GCAGGTGATG AAGGACGCTG GCGAGAAGTT CGATCAAAAG GCGTACATCC CGGCAGTGGC GGGTTACTAC ACGTCGTCGA AGGGCGAGAT GCTGTCGTTC CCCTTCAATA GCTCGACGAC TGTCTTCTAT TACAACAAGG ATGCCTTCAA GAAGGCGGGC ATTTCCGCTC CACCCAAGAC CTGGCCCGAG GTGATGCAGT ACTCGGCCAA GCTCAAGGCG TCGGGCCAGA ACTGCGCCTA TACCACCGAC TGGCAGAGCT GGGTGCACCT GGAGAGCTTC TCCGCCTGGC ACAACACGCT CTTCGCCACG AAGAACAACG GTTTTGGCGG CACCGACGCG CGACTGGTCT TCAATAGCCC GCTGCATGTG AAGCACATCA CGAATCTGCA GGAGATGGTG AAGAAGGGCT ACTTCAGCTA CGGCGGCCGC AAGGCGGAGT CGCAGGCCAA GTTCTACAAC GGCGAGTGCG CGATGTTCAC GGGCTCGTCC GCATCGCTGG CCAATATCCG CAAGAATGCC AAATTCCAGT TTGGTGTGTC GCAACTGCCG TACTACCCGG ACGTGCCGGG CGCGCCGCAG AACACGATCA TCGGCGGTGC ATCGCTGTGG GTGATGGGCG GCAAGAAGGC CGACGAGTAC AAGGGCGTGG CCAAGTTCTT CACGTTCCTG TCGCGACCGG AGATCCAGTC GGACTGGCAC CAGGCCACTG GCTACCTGCC GGTGACGATG GCTGCGTATG AGATGACGAG GAAGTCGGGT TACTACGACA AGAACCCGGG TGCCGATGTC TCGGTCGAGC AGATGGTCGT GAAGACCACC GACAAGTCGC GCGGCGTGCG TCTCGGCAAC CTCGTGCAGA TCCGTACCGT GATCGACGAG GAACTCGAAG CGGTGTGGGC TGGCAAGAAG GAGCCGAAGG CCGCGCTCGA CAACGCCGTG GCACGTGGCA ACGAACTGCT GGAGCGTTTC CAGAAGACCG CCAGGGAATA A
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Protein sequence | MSFPRTALKF AAVASLALAG TAHAAVEIQW WHAMQGALND KVNEIADKFN ASQSDYKIVP VNKGNYDETM AAGIAAFRAG GAPAILQVFE VGTATMMSAK GAIKPVSQVM KDAGEKFDQK AYIPAVAGYY TSSKGEMLSF PFNSSTTVFY YNKDAFKKAG ISAPPKTWPE VMQYSAKLKA SGQNCAYTTD WQSWVHLESF SAWHNTLFAT KNNGFGGTDA RLVFNSPLHV KHITNLQEMV KKGYFSYGGR KAESQAKFYN GECAMFTGSS ASLANIRKNA KFQFGVSQLP YYPDVPGAPQ NTIIGGASLW VMGGKKADEY KGVAKFFTFL SRPEIQSDWH QATGYLPVTM AAYEMTRKSG YYDKNPGADV SVEQMVVKTT DKSRGVRLGN LVQIRTVIDE ELEAVWAGKK EPKAALDNAV ARGNELLERF QKTARE
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