More than 300 homologs were found in PanDaTox collection
for query gene Arth_2948 on replicon NC_008541
Organism: Arthrobacter sp. FB24



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008541  Arth_2948  extracellular solute-binding protein  100 
 
 
448 aa  912    Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2663  extracellular solute-binding protein family 1  80.77 
 
 
468 aa  707    Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_29870  carbohydrate-binding protein  66.01 
 
 
448 aa  565  1e-160  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0297  extracellular solute-binding protein family 1  51.33 
 
 
453 aa  426  1e-118  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0248346 
 
 
-
 
NC_013174  Jden_2244  extracellular solute-binding protein family 1  44.64 
 
 
455 aa  369  1e-101  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.846858 
 
 
-
 
NC_013521  Sked_18880  carbohydrate-binding protein  46.24 
 
 
460 aa  370  1e-101  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal  0.173455 
 
 
-
 
NC_012669  Bcav_0894  extracellular solute-binding protein family 1  44.07 
 
 
470 aa  349  7e-95  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.444762  normal  0.144357 
 
 
-
 
NC_009565  TBFG_12848  sn-glycerol-3-phosphate-binding lipoprotein ugpB  41.31 
 
 
436 aa  322  6e-87  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000142723  normal 
 
 
-
 
NC_011831  Cagg_2195  extracellular solute-binding protein family 1  38.85 
 
 
450 aa  288  1e-76  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  38.66 
 
 
448 aa  288  2e-76  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3527  extracellular solute-binding protein family 1  43.47 
 
 
436 aa  286  4e-76  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0113  extracellular solute-binding protein  38.26 
 
 
455 aa  264  2e-69  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.270734  normal 
 
 
-
 
NC_009523  RoseRS_4566  extracellular solute-binding protein  37.84 
 
 
453 aa  254  3e-66  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1508  extracellular solute-binding protein family 1  34.48 
 
 
451 aa  226  5.0000000000000005e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.55774  normal 
 
 
-
 
NC_012669  Bcav_1527  extracellular solute-binding protein family 1  31.51 
 
 
465 aa  187  4e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.922727  normal  0.377984 
 
 
-
 
NC_013172  Bfae_30840  ABC-type sugar transport system, periplasmic component  30.33 
 
 
463 aa  174  2.9999999999999996e-42  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  32.22 
 
 
441 aa  149  9e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.08 
 
 
458 aa  140  3e-32  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  28.47 
 
 
445 aa  140  7e-32  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.97 
 
 
458 aa  138  2e-31  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  28.97 
 
 
458 aa  137  3.0000000000000003e-31  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.97 
 
 
458 aa  137  3.0000000000000003e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.97 
 
 
458 aa  137  3.0000000000000003e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  28.97 
 
 
458 aa  137  3.0000000000000003e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E3870  glycerol-3-phosphate transporter periplasmic binding protein  32.78 
 
 
438 aa  137  3.0000000000000003e-31  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.97 
 
 
458 aa  138  3.0000000000000003e-31  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  28.5 
 
 
458 aa  136  7.000000000000001e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  28.72 
 
 
458 aa  136  9e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03302  glycerol-3-phosphate transporter subunit  32.51 
 
 
438 aa  136  9.999999999999999e-31  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0262  extracellular solute-binding protein family 1  32.51 
 
 
438 aa  136  9.999999999999999e-31  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3650  glycerol-3-phosphate transporter periplasmic binding protein  32.51 
 
 
438 aa  136  9.999999999999999e-31  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4767  glycerol-3-phosphate transporter periplasmic binding protein  32.51 
 
 
438 aa  136  9.999999999999999e-31  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.552805 
 
 
-
 
NC_010468  EcolC_0263  glycerol-3-phosphate transporter periplasmic binding protein  32.51 
 
 
438 aa  136  9.999999999999999e-31  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_3732  glycerol-3-phosphate transporter periplasmic binding protein  32.33 
 
 
438 aa  135  9.999999999999999e-31  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_03255  hypothetical protein  32.51 
 
 
438 aa  136  9.999999999999999e-31  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.72 
 
 
458 aa  135  1.9999999999999998e-30  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_3931  glycerol-3-phosphate transporter periplasmic binding protein  32.23 
 
 
438 aa  134  1.9999999999999998e-30  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  32.06 
 
 
438 aa  129  1.0000000000000001e-28  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  32.06 
 
 
438 aa  129  1.0000000000000001e-28  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  32.06 
 
 
438 aa  129  1.0000000000000001e-28  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  30.18 
 
 
452 aa  128  2.0000000000000002e-28  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  32.06 
 
 
438 aa  128  2.0000000000000002e-28  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  30.62 
 
 
435 aa  125  2e-27  Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  31.76 
 
 
438 aa  125  2e-27  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  30.62 
 
 
440 aa  124  3e-27  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  31.22 
 
 
440 aa  123  7e-27  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  31.49 
 
 
444 aa  122  9.999999999999999e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  31.92 
 
 
431 aa  121  1.9999999999999998e-26  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  31.05 
 
 
431 aa  121  3e-26  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  32.43 
 
 
431 aa  121  3e-26  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  30.55 
 
 
444 aa  120  4.9999999999999996e-26  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  27.04 
 
 
439 aa  118  1.9999999999999998e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  31.07 
 
 
431 aa  117  3.9999999999999997e-25  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_010465  YPK_3962  glycerol-3-phosphate transporter periplasmic binding protein  31.86 
 
 
439 aa  116  6.9999999999999995e-25  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0256  glycerol-3-phosphate transporter periplasmic binding protein  31.86 
 
 
439 aa  116  6.9999999999999995e-25  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3655  glycerol-3-phosphate transporter periplasmic binding protein  31.86 
 
 
439 aa  116  6.9999999999999995e-25  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0747  extracellular solute-binding protein  29.53 
 
 
433 aa  115  1.0000000000000001e-24  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00190936 
 
 
-
 
NC_012912  Dd1591_4045  glycerol-3-phosphate transporter periplasmic binding protein  30.09 
 
 
439 aa  114  3e-24  Dickeya zeae Ech1591  Bacteria  normal  0.661181  n/a   
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  30.41 
 
 
439 aa  114  4.0000000000000004e-24  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_012880  Dd703_3861  glycerol-3-phosphate transporter periplasmic binding protein  30 
 
 
439 aa  113  6e-24  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0631  extracellular solute-binding protein family 1  30.34 
 
 
435 aa  113  7.000000000000001e-24  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  31.34 
 
 
431 aa  112  1.0000000000000001e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_012669  Bcav_2846  extracellular solute-binding protein family 1  31.39 
 
 
435 aa  112  2.0000000000000002e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.687638 
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  27.57 
 
 
425 aa  110  7.000000000000001e-23  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_012852  Rleg_6261  extracellular solute-binding protein family 1  27.15 
 
 
428 aa  109  1e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.689417 
 
 
-
 
NC_013421  Pecwa_0845  extracellular solute-binding protein family 1  31.08 
 
 
435 aa  108  2e-22  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  28.03 
 
 
437 aa  107  5e-22  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_009667  Oant_1666  extracellular solute-binding protein  31.01 
 
 
421 aa  106  1e-21  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  31.73 
 
 
420 aa  105  1e-21  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  27.76 
 
 
437 aa  104  3e-21  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  26.59 
 
 
462 aa  102  1e-20  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA1180  sugar ABC transporter, periplasmic sugar-binding protein, putative  29.62 
 
 
421 aa  100  5e-20  Brucella suis 1330  Bacteria  normal  0.409061  n/a   
 
 
-
 
NC_009380  Strop_0803  extracellular solute-binding protein  28.5 
 
 
433 aa  100  7e-20  Salinispora tropica CNB-440  Bacteria  normal  0.437157  normal 
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  28.02 
 
 
441 aa  99.8  8e-20  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2744  glycerol-3-phosphate transporter periplasmic binding protein  28.02 
 
 
441 aa  98.6  2e-19  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3726  glycerol-3-phosphate transporter periplasmic binding protein  28.02 
 
 
441 aa  98.6  2e-19  Burkholderia pseudomallei 1710b  Bacteria  normal  0.268589  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3209  glycerol-3-phosphate transporter periplasmic binding protein  28.02 
 
 
441 aa  98.6  2e-19  Burkholderia mallei SAVP1  Bacteria  normal  0.0248662  n/a   
 
 
-
 
NC_008836  BMA10229_A1760  glycerol-3-phosphate transporter periplasmic binding protein  28.02 
 
 
441 aa  98.6  2e-19  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  27.14 
 
 
441 aa  98.6  2e-19  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2794  glycerol-3-phosphate transporter periplasmic binding protein  28.02 
 
 
441 aa  98.6  2e-19  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0374  glycerol-3-phosphate transporter periplasmic binding protein  27.95 
 
 
444 aa  97.8  4e-19  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2712  glycerol-3-phosphate transporter periplasmic binding protein  27.95 
 
 
443 aa  97.8  4e-19  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.290307  n/a   
 
 
-
 
NC_008542  Bcen2424_0395  glycerol-3-phosphate transporter periplasmic binding protein  27.95 
 
 
443 aa  97.8  4e-19  Burkholderia cenocepacia HI2424  Bacteria  normal  0.954301  n/a   
 
 
-
 
NC_007973  Rmet_2055  extracellular solute-binding protein  29.03 
 
 
436 aa  97.1  6e-19  Cupriavidus metallidurans CH34  Bacteria  normal  0.822621  normal 
 
 
-
 
NC_013946  Mrub_0791  extracellular solute-binding protein family 1  26.36 
 
 
399 aa  96.7  7e-19  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.418273 
 
 
-
 
NC_007651  BTH_I3021  glycerol-3-phosphate transporter periplasmic binding protein  27.27 
 
 
441 aa  96.3  9e-19  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2173  extracellular solute-binding protein family 1  27.62 
 
 
445 aa  96.3  1e-18  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00822083  n/a   
 
 
-
 
NC_009076  BURPS1106A_3755  glycerol-3-phosphate transporter periplasmic binding protein  27.75 
 
 
441 aa  95.9  1e-18  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  25.66 
 
 
436 aa  95.5  2e-18  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  25.21 
 
 
414 aa  94.7  3e-18  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  25.92 
 
 
461 aa  94  5e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_012917  PC1_1881  extracellular solute-binding protein family 1  31 
 
 
445 aa  94  5e-18  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000340671  n/a   
 
 
-
 
NC_012856  Rpic12D_1185  extracellular solute-binding protein family 1  27.63 
 
 
438 aa  93.6  7e-18  Ralstonia pickettii 12D  Bacteria  normal  0.276437  normal 
 
 
-
 
NC_013159  Svir_11620  ABC-type sugar transport system, periplasmic component  30.12 
 
 
426 aa  93.6  7e-18  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1092  extracellular solute-binding protein family 1  27.63 
 
 
438 aa  93.2  8e-18  Ralstonia pickettii 12J  Bacteria  normal  0.0503452  normal 
 
 
-
 
NC_007951  Bxe_A0448  glycerol-3-phosphate transporter periplasmic binding protein  31.34 
 
 
441 aa  92.8  1e-17  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0314  glycerol-3-phosphate transporter periplasmic binding protein  27.47 
 
 
444 aa  92.4  1e-17  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3509  glycerol-3-phosphate transporter periplasmic binding protein  30.74 
 
 
441 aa  92.4  1e-17  Burkholderia phytofirmans PsJN  Bacteria  normal  0.839022  normal  0.0272066 
 
 
-
 
NC_007510  Bcep18194_A3492  glycerol-3-phosphate transporter periplasmic binding protein  27.2 
 
 
444 aa  91.7  2e-17  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0323  glycerol-3-phosphate transporter periplasmic binding protein  27.47 
 
 
444 aa  92  2e-17  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.839712 
 
 
-
 
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