Gene Bcav_0894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0894 
Symbol 
ID7860259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp993566 
End bp994978 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content70% 
IMG OID643864976 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002880917 
Protein GI229819391 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.444762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.144357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCCC CCACCTCCCG CCGCCCGTCC GGGCTGTGGA CGCCGTCCCG TGGAGCGCGG 
GCGACCTGGA CCCCCTCCCG CCGTGACGTG CTCCGCATCG GGGGTGTCGG CGCTGCCGGC
GGCCTCGTCG CGGCGTGCGG CGGGCCGAGC GTCGGCGGCG ACGACGGGAC CGCGACGTCG
GACGCGACCG ACTGGTCGAG CGTCGAGCCC GCCTCGAAGA TCACGTGGTG GAGCAACCAC
CCCGGGAACA CGAAGGAGCT CGAGGAGTCC TTCATCGCTG CGTTCAACGA GGAGCACCCG
GACATCGAGG TCGAGCTCGT CACCGCGGGT GCGAACTACG ACGAGATCGC GCAGCGGTTC
CAGGCCGCCG CGGGCACCGA CGAGATCCCT GACCTCGTGG GCGCCAGCGA CGTGTGGTGG
TTCCGCTACT TCGTCAACGG CCAGATCATC CCCGTCGACG ACGTCTTCGA GTTCCTCGAG
GTGGACACGT CCGACTTCGT GGAGACGCTC TACAGCGACT ACGAGTACGA GGGCCTGCAC
TACGCCGCGC CCTACGCCCG GTCGACGCCG CTCTTCTACT ACAACAAGGA CGTCTGGGCT
GCGGCCGGCC TGCCCGACCG CGGTCCGGAG ACGTGGGAGG AGCTGCAGGA GTGGGGCCCC
GCGATCCGGG CGCACATCCC GGCCGACGGC GCCCCGCTCG GCCTGAGCAT CGGTCCGTCC
TGGTCCGGCT GGTGGTACTC GAACATCAGC TGGGGCCTCG GCGCCCAGAT GAGCGACGAG
TGGACGGTCA CGCTGGACTC GGAGGAGTCG CTCGCGGCCG GCAACTTCGT CGCGGAGATG
TACCACGGCG AGAACGCGTT CGCCGGCTTC GGGACGGACA CCAACGCGGA CTTCCAGGCG
GGCATCTTCG CCTCGCTCAT CGGGTCGACC GGCTCGCTGA CCGGGCACCT CGAGCTCGCG
CAGTTCGAGC TCGGCACGGC GTACCTGCCG GACGGTCCGG TCGCCGGCCC GAACGTGCCG
ACCGGTGGCA CCGGCGTCGC GATCGCTAAG GACCGCACCC CGGAGCAGCA GCTCGCGGCG
GCGATGTTCC TGGCGTTCCT GTCCGACACC GACCGCACCG CCGAGTTCTC CTCGGCGACT
GGGTACATGC CGGTGCGGAC CTCCGCCATC GACGGCGACG TCATGGGTGC CCTCTACGAG
GAGACGCCGC AGTTCCGCAC GTCTGTCGAC CAGCTGCAGG AGAAGACGCG GACGCAGGAC
TGGGTGCGCG TGTTCACGCC GGGCGGTGAC CAGATCATCA CCGACGGCAT CGAGCAGCTC
GTCCTCAACG GCGCGAACGC CGAGGACGTG TGGCCGGACG TCACGACGAA GCTCGAGCGG
GCGTACTCCG AGAACATCGA GCCGTACCTG TGA
 
Protein sequence
MPSPTSRRPS GLWTPSRGAR ATWTPSRRDV LRIGGVGAAG GLVAACGGPS VGGDDGTATS 
DATDWSSVEP ASKITWWSNH PGNTKELEES FIAAFNEEHP DIEVELVTAG ANYDEIAQRF
QAAAGTDEIP DLVGASDVWW FRYFVNGQII PVDDVFEFLE VDTSDFVETL YSDYEYEGLH
YAAPYARSTP LFYYNKDVWA AAGLPDRGPE TWEELQEWGP AIRAHIPADG APLGLSIGPS
WSGWWYSNIS WGLGAQMSDE WTVTLDSEES LAAGNFVAEM YHGENAFAGF GTDTNADFQA
GIFASLIGST GSLTGHLELA QFELGTAYLP DGPVAGPNVP TGGTGVAIAK DRTPEQQLAA
AMFLAFLSDT DRTAEFSSAT GYMPVRTSAI DGDVMGALYE ETPQFRTSVD QLQEKTRTQD
WVRVFTPGGD QIITDGIEQL VLNGANAEDV WPDVTTKLER AYSENIEPYL