More than 300 homologs were found in PanDaTox collection
for query gene Sked_18880 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_18880  carbohydrate-binding protein  100 
 
 
460 aa  932    Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal  0.173455 
 
 
-
 
NC_013174  Jden_2244  extracellular solute-binding protein family 1  69.37 
 
 
455 aa  620  1e-176  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.846858 
 
 
-
 
NC_012669  Bcav_0894  extracellular solute-binding protein family 1  65.19 
 
 
470 aa  583  1.0000000000000001e-165  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.444762  normal  0.144357 
 
 
-
 
NC_009664  Krad_0297  extracellular solute-binding protein family 1  51.02 
 
 
453 aa  474  1e-132  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0248346 
 
 
-
 
NC_011886  Achl_2663  extracellular solute-binding protein family 1  46.98 
 
 
468 aa  372  1e-102  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_29870  carbohydrate-binding protein  46.08 
 
 
448 aa  362  6e-99  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12848  sn-glycerol-3-phosphate-binding lipoprotein ugpB  44.75 
 
 
436 aa  352  1e-95  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000142723  normal 
 
 
-
 
NC_008541  Arth_2948  extracellular solute-binding protein  45.95 
 
 
448 aa  345  7e-94  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3527  extracellular solute-binding protein family 1  41.16 
 
 
436 aa  293  3e-78  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2195  extracellular solute-binding protein family 1  37.78 
 
 
450 aa  281  1e-74  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0113  extracellular solute-binding protein  38.4 
 
 
455 aa  268  1e-70  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.270734  normal 
 
 
-
 
NC_009523  RoseRS_4566  extracellular solute-binding protein  38.48 
 
 
453 aa  265  8.999999999999999e-70  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  36.6 
 
 
448 aa  265  2e-69  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1508  extracellular solute-binding protein family 1  35.07 
 
 
451 aa  229  9e-59  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.55774  normal 
 
 
-
 
NC_012669  Bcav_1527  extracellular solute-binding protein family 1  30.6 
 
 
465 aa  178  2e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.922727  normal  0.377984 
 
 
-
 
NC_013172  Bfae_30840  ABC-type sugar transport system, periplasmic component  31.66 
 
 
463 aa  177  5e-43  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  26.61 
 
 
445 aa  152  1e-35  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.55 
 
 
458 aa  145  2e-33  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.32 
 
 
458 aa  144  4e-33  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  27.32 
 
 
458 aa  143  6e-33  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.32 
 
 
458 aa  143  6e-33  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  27.32 
 
 
458 aa  143  6e-33  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.32 
 
 
458 aa  143  6e-33  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.88 
 
 
458 aa  143  7e-33  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  27.46 
 
 
458 aa  142  9e-33  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.32 
 
 
458 aa  140  6e-32  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  25.48 
 
 
439 aa  137  3.0000000000000003e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  27.42 
 
 
458 aa  135  1.9999999999999998e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  29.76 
 
 
440 aa  120  3.9999999999999996e-26  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  29.46 
 
 
435 aa  119  9e-26  Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  29.67 
 
 
441 aa  119  9.999999999999999e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0323  glycerol-3-phosphate transporter periplasmic binding protein  29.86 
 
 
444 aa  112  9e-24  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.839712 
 
 
-
 
NC_008390  Bamb_0314  glycerol-3-phosphate transporter periplasmic binding protein  29.86 
 
 
444 aa  112  1.0000000000000001e-23  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0747  extracellular solute-binding protein  28.07 
 
 
433 aa  112  2.0000000000000002e-23  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00190936 
 
 
-
 
NC_013159  Svir_11620  ABC-type sugar transport system, periplasmic component  30.3 
 
 
426 aa  111  3e-23  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0298  glycerol-3-phosphate transporter periplasmic binding protein  29.67 
 
 
444 aa  110  4.0000000000000004e-23  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0631  extracellular solute-binding protein family 1  28.99 
 
 
435 aa  108  2e-22  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2709  glycerol-3-phosphate transporter periplasmic binding protein  28.84 
 
 
441 aa  107  3e-22  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0803  extracellular solute-binding protein  28.18 
 
 
433 aa  107  4e-22  Salinispora tropica CNB-440  Bacteria  normal  0.437157  normal 
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  29.88 
 
 
452 aa  107  5e-22  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  24.7 
 
 
462 aa  107  5e-22  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3492  glycerol-3-phosphate transporter periplasmic binding protein  28.77 
 
 
444 aa  107  6e-22  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0374  glycerol-3-phosphate transporter periplasmic binding protein  28.49 
 
 
444 aa  107  6e-22  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2712  glycerol-3-phosphate transporter periplasmic binding protein  28.49 
 
 
443 aa  107  7e-22  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.290307  n/a   
 
 
-
 
NC_008542  Bcen2424_0395  glycerol-3-phosphate transporter periplasmic binding protein  28.49 
 
 
443 aa  107  7e-22  Burkholderia cenocepacia HI2424  Bacteria  normal  0.954301  n/a   
 
 
-
 
NC_006348  BMA2744  glycerol-3-phosphate transporter periplasmic binding protein  28.57 
 
 
441 aa  106  1e-21  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3726  glycerol-3-phosphate transporter periplasmic binding protein  28.57 
 
 
441 aa  106  1e-21  Burkholderia pseudomallei 1710b  Bacteria  normal  0.268589  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3209  glycerol-3-phosphate transporter periplasmic binding protein  28.57 
 
 
441 aa  106  1e-21  Burkholderia mallei SAVP1  Bacteria  normal  0.0248662  n/a   
 
 
-
 
NC_008836  BMA10229_A1760  glycerol-3-phosphate transporter periplasmic binding protein  28.57 
 
 
441 aa  106  1e-21  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3755  glycerol-3-phosphate transporter periplasmic binding protein  28.57 
 
 
441 aa  105  1e-21  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2794  glycerol-3-phosphate transporter periplasmic binding protein  28.57 
 
 
441 aa  106  1e-21  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0448  glycerol-3-phosphate transporter periplasmic binding protein  27.4 
 
 
441 aa  105  2e-21  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  27.98 
 
 
441 aa  104  3e-21  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3021  glycerol-3-phosphate transporter periplasmic binding protein  27.95 
 
 
441 aa  103  4e-21  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0322  extracellular solute-binding protein  24.79 
 
 
419 aa  104  4e-21  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6261  extracellular solute-binding protein family 1  25.53 
 
 
428 aa  103  5e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.689417 
 
 
-
 
NC_010483  TRQ2_0340  extracellular solute-binding protein  24.79 
 
 
419 aa  103  5e-21  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0270  extracellular solute-binding protein  24.86 
 
 
419 aa  103  5e-21  Thermosipho melanesiensis BI429  Bacteria  normal  0.562219  n/a   
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  28.3 
 
 
441 aa  102  1e-20  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  24.57 
 
 
435 aa  102  2e-20  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3509  glycerol-3-phosphate transporter periplasmic binding protein  26.85 
 
 
441 aa  101  3e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  0.839022  normal  0.0272066 
 
 
-
 
NC_013421  Pecwa_0845  extracellular solute-binding protein family 1  27.81 
 
 
435 aa  101  3e-20  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  26.21 
 
 
423 aa  101  3e-20  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  27.1 
 
 
437 aa  100  5e-20  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  25.47 
 
 
444 aa  100  5e-20  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1881  extracellular solute-binding protein family 1  27.15 
 
 
445 aa  100  5e-20  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000340671  n/a   
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  26.93 
 
 
437 aa  100  6e-20  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_008782  Ajs_0862  extracellular solute-binding protein  26.32 
 
 
437 aa  99.8  9e-20  Acidovorax sp. JS42  Bacteria  normal  normal  0.597127 
 
 
-
 
CP001509  ECD_03302  glycerol-3-phosphate transporter subunit  25.9 
 
 
438 aa  99.4  1e-19  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0262  extracellular solute-binding protein family 1  25.9 
 
 
438 aa  99.4  1e-19  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3650  glycerol-3-phosphate transporter periplasmic binding protein  25.9 
 
 
438 aa  99.4  1e-19  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03255  hypothetical protein  25.9 
 
 
438 aa  99.4  1e-19  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  25.62 
 
 
438 aa  99.4  1e-19  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  25.62 
 
 
438 aa  99.4  1e-19  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  25.62 
 
 
438 aa  99.4  1e-19  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_4767  glycerol-3-phosphate transporter periplasmic binding protein  25.9 
 
 
438 aa  99.4  1e-19  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.552805 
 
 
-
 
NC_009667  Oant_2485  extracellular solute-binding protein  27.86 
 
 
415 aa  99  1e-19  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00421769  n/a   
 
 
-
 
NC_010468  EcolC_0263  glycerol-3-phosphate transporter periplasmic binding protein  25.9 
 
 
438 aa  99.4  1e-19  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_3732  glycerol-3-phosphate transporter periplasmic binding protein  25.82 
 
 
438 aa  98.6  2e-19  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  24.26 
 
 
444 aa  99  2e-19  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3285  hypothetical protein  27.6 
 
 
431 aa  98.6  2e-19  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.339711  normal 
 
 
-
 
NC_013421  Pecwa_2173  extracellular solute-binding protein family 1  26.34 
 
 
445 aa  98.6  2e-19  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00822083  n/a   
 
 
-
 
NC_012791  Vapar_4001  extracellular solute-binding protein family 1  26.63 
 
 
442 aa  98.6  2e-19  Variovorax paradoxus S110  Bacteria  normal  0.131149  n/a   
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  25.62 
 
 
438 aa  99  2e-19  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_3931  glycerol-3-phosphate transporter periplasmic binding protein  25.62 
 
 
438 aa  98.2  3e-19  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E3870  glycerol-3-phosphate transporter periplasmic binding protein  25.9 
 
 
438 aa  97.8  3e-19  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  29 
 
 
431 aa  97.4  4e-19  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  22.4 
 
 
414 aa  97.4  4e-19  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1886  extracellular solute-binding protein family 1  29.31 
 
 
435 aa  97.8  4e-19  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.23125 
 
 
-
 
NC_011992  Dtpsy_0791  extracellular solute-binding protein family 1  26.08 
 
 
437 aa  97.4  5e-19  Acidovorax ebreus TPSY  Bacteria  normal  0.721808  n/a   
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  26.72 
 
 
440 aa  97.4  5e-19  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_011004  Rpal_0129  extracellular solute-binding protein family 1  27.45 
 
 
426 aa  97.4  5e-19  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.57996  n/a   
 
 
-
 
NC_007494  RSP_3290  ABC glycerol-3-phosphate transporter, periplasmic binding protein, UgpB  26.88 
 
 
431 aa  97.1  6e-19  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1895  extracellular solute-binding protein  29.45 
 
 
445 aa  96.7  8e-19  Frankia sp. EAN1pec  Bacteria  normal  0.854658  normal 
 
 
-
 
NC_009050  Rsph17029_4022  extracellular solute-binding protein  26.88 
 
 
431 aa  96.7  8e-19  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0097  extracellular solute-binding protein  27.44 
 
 
434 aa  96.3  1e-18  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  26.75 
 
 
431 aa  95.9  1e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  25.34 
 
 
438 aa  95.9  1e-18  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  26.03 
 
 
420 aa  95.1  2e-18  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  24.51 
 
 
437 aa  95.1  2e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
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