| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_18880 |
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| Symbol | |
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| ID | 8633523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 2095562 |
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| End bp | 2096944 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | carbohydrate-binding protein |
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| Protein accession | YP_003314647 |
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| Protein GI | 269795192 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.141989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.173455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGAACT CGACCAACGT CTTCTCCGCC GCGAACGGCT GGACCCCCAG CCGCCGCAGC
GTCCTGCAGC TCGGTGGCCT CGGCGCCCTC GGCCTGGCCC TGGCTGCCTG CAGCGGCCCC
TCCGTCAGCG AGGGCAGCGC CCGCGCCGAC GCCGAGCCCG CGACCGACTG GTCCTCGGTC
ACCCCGGCCA CGGAGATCAC CTGGTGGTCC AACCACCCGG GCGCCTCGAA GCCCATCGAG
GAAGAGCTCA TCAAGCGCTT CAACGCCGTG CACCCCGAGA TCGCCGTCAA GCTCGTCACC
GCGGGCGCCA ACTACGACGA GGTCGCCCAG CGCTTCCAGG CGGCGTCCTC GACGTCGAAC
CTCCCCGACC TGGTCATCTC GTCGGACGTC TGGTGGTTCC GCTACTTCCT CAACGGCCAG
ATCATGCCGC TCGACGAGAT CTTCTCGCAC CTCGAGGTCG AAACCGCAGA CTTCAACGCG
ACGCTGTACT CGGACTACGA GTTCGACTCC AAGCACTGGG CCGCGCCCTA CGCCCGCTCC
ACGCCGCTCT TCTACTACAA CAAGACGGTG TGGGCTGCTG CCGGCCTGCC CGACCGCGGA
CCGAAGACGT GGGCCGAGCT CGAGGAGTGG GCTCCGGCCA TCCGCGAGCA GCTGCCCGCC
GACGGCGCGC CGCTGGGCCT GGGCACCGGG ACCTCGTGGG CCGGCTGGTG GATGGAGAAC
ATCATCTGGG GCCAGGGCGG CGCCTACTCG GACGAGTGGA AGGTCACCCT CGACACCCCG
CAGGCCGAGG CGGCCGGCGA GTTCGTCCGC GGCCTGTTCA ACGACTCGAA GGTCGCGGGC
GTCGGCACCG ACACCCAGGC GAACTTCGCC GCGGGCATCT TCGGCTCCTT CGTCGGCTCG
ACCGGGTCGC TCAAGGGCCT GCTCGACGCT GCCGACTTCG AGCTCGGCAC CTCGTTCCTG
CCCGACGGCC CGAACGGCTC GGGCGTCCCG ACCGGTGGCA CCGGCCTCGC GATCCCCGCG
TCGCGCTCCC CCGAGCAGCA GCTCGCCGCG GCGATCTTCC TCGCTTTCAT CACGGACCCC
GACAATACGG CGTACTTCTC GGCGAACACC GGCTACATGC CCGTTCGTAC CTCCGCGCAG
GAGGGTGAGA CGATGACGGA GATCTACGCG AACACCCCGC AGTTCCGCAC GGCGATCGAC
CAGCTCGAGC AGAAGACGCG CACCCAGGAC TGGGTCCGCG TGTTCGTGCC CGGCGGTGAC
CAGATCCTCA CCGACGGCAT CGAGCAGATG GTGCTCAAGA ACACCCCGGC CGCCGAGGCG
TGGGCTGCGA TCACACCCCG ACTGGAGAAG GCGTTCTCCG AGAACGTGGA GCCCTACCTG
TGA
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| Protein sequence | MSNSTNVFSA ANGWTPSRRS VLQLGGLGAL GLALAACSGP SVSEGSARAD AEPATDWSSV
TPATEITWWS NHPGASKPIE EELIKRFNAV HPEIAVKLVT AGANYDEVAQ RFQAASSTSN
LPDLVISSDV WWFRYFLNGQ IMPLDEIFSH LEVETADFNA TLYSDYEFDS KHWAAPYARS
TPLFYYNKTV WAAAGLPDRG PKTWAELEEW APAIREQLPA DGAPLGLGTG TSWAGWWMEN
IIWGQGGAYS DEWKVTLDTP QAEAAGEFVR GLFNDSKVAG VGTDTQANFA AGIFGSFVGS
TGSLKGLLDA ADFELGTSFL PDGPNGSGVP TGGTGLAIPA SRSPEQQLAA AIFLAFITDP
DNTAYFSANT GYMPVRTSAQ EGETMTEIYA NTPQFRTAID QLEQKTRTQD WVRVFVPGGD
QILTDGIEQM VLKNTPAAEA WAAITPRLEK AFSENVEPYL
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