Gene Sked_18880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_18880 
Symbol 
ID8633523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2095562 
End bp2096944 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content69% 
IMG OID 
Productcarbohydrate-binding protein 
Protein accessionYP_003314647 
Protein GI269795192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.141989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.173455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGAACT CGACCAACGT CTTCTCCGCC GCGAACGGCT GGACCCCCAG CCGCCGCAGC 
GTCCTGCAGC TCGGTGGCCT CGGCGCCCTC GGCCTGGCCC TGGCTGCCTG CAGCGGCCCC
TCCGTCAGCG AGGGCAGCGC CCGCGCCGAC GCCGAGCCCG CGACCGACTG GTCCTCGGTC
ACCCCGGCCA CGGAGATCAC CTGGTGGTCC AACCACCCGG GCGCCTCGAA GCCCATCGAG
GAAGAGCTCA TCAAGCGCTT CAACGCCGTG CACCCCGAGA TCGCCGTCAA GCTCGTCACC
GCGGGCGCCA ACTACGACGA GGTCGCCCAG CGCTTCCAGG CGGCGTCCTC GACGTCGAAC
CTCCCCGACC TGGTCATCTC GTCGGACGTC TGGTGGTTCC GCTACTTCCT CAACGGCCAG
ATCATGCCGC TCGACGAGAT CTTCTCGCAC CTCGAGGTCG AAACCGCAGA CTTCAACGCG
ACGCTGTACT CGGACTACGA GTTCGACTCC AAGCACTGGG CCGCGCCCTA CGCCCGCTCC
ACGCCGCTCT TCTACTACAA CAAGACGGTG TGGGCTGCTG CCGGCCTGCC CGACCGCGGA
CCGAAGACGT GGGCCGAGCT CGAGGAGTGG GCTCCGGCCA TCCGCGAGCA GCTGCCCGCC
GACGGCGCGC CGCTGGGCCT GGGCACCGGG ACCTCGTGGG CCGGCTGGTG GATGGAGAAC
ATCATCTGGG GCCAGGGCGG CGCCTACTCG GACGAGTGGA AGGTCACCCT CGACACCCCG
CAGGCCGAGG CGGCCGGCGA GTTCGTCCGC GGCCTGTTCA ACGACTCGAA GGTCGCGGGC
GTCGGCACCG ACACCCAGGC GAACTTCGCC GCGGGCATCT TCGGCTCCTT CGTCGGCTCG
ACCGGGTCGC TCAAGGGCCT GCTCGACGCT GCCGACTTCG AGCTCGGCAC CTCGTTCCTG
CCCGACGGCC CGAACGGCTC GGGCGTCCCG ACCGGTGGCA CCGGCCTCGC GATCCCCGCG
TCGCGCTCCC CCGAGCAGCA GCTCGCCGCG GCGATCTTCC TCGCTTTCAT CACGGACCCC
GACAATACGG CGTACTTCTC GGCGAACACC GGCTACATGC CCGTTCGTAC CTCCGCGCAG
GAGGGTGAGA CGATGACGGA GATCTACGCG AACACCCCGC AGTTCCGCAC GGCGATCGAC
CAGCTCGAGC AGAAGACGCG CACCCAGGAC TGGGTCCGCG TGTTCGTGCC CGGCGGTGAC
CAGATCCTCA CCGACGGCAT CGAGCAGATG GTGCTCAAGA ACACCCCGGC CGCCGAGGCG
TGGGCTGCGA TCACACCCCG ACTGGAGAAG GCGTTCTCCG AGAACGTGGA GCCCTACCTG
TGA
 
Protein sequence
MSNSTNVFSA ANGWTPSRRS VLQLGGLGAL GLALAACSGP SVSEGSARAD AEPATDWSSV 
TPATEITWWS NHPGASKPIE EELIKRFNAV HPEIAVKLVT AGANYDEVAQ RFQAASSTSN
LPDLVISSDV WWFRYFLNGQ IMPLDEIFSH LEVETADFNA TLYSDYEFDS KHWAAPYARS
TPLFYYNKTV WAAAGLPDRG PKTWAELEEW APAIREQLPA DGAPLGLGTG TSWAGWWMEN
IIWGQGGAYS DEWKVTLDTP QAEAAGEFVR GLFNDSKVAG VGTDTQANFA AGIFGSFVGS
TGSLKGLLDA ADFELGTSFL PDGPNGSGVP TGGTGLAIPA SRSPEQQLAA AIFLAFITDP
DNTAYFSANT GYMPVRTSAQ EGETMTEIYA NTPQFRTAID QLEQKTRTQD WVRVFVPGGD
QILTDGIEQM VLKNTPAAEA WAAITPRLEK AFSENVEPYL