More than 300 homologs were found in PanDaTox collection
for query gene Bcav_0894 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_0894  extracellular solute-binding protein family 1  100 
 
 
470 aa  951    Beutenbergia cavernae DSM 12333  Bacteria  normal  0.444762  normal  0.144357 
 
 
-
 
NC_013521  Sked_18880  carbohydrate-binding protein  65.19 
 
 
460 aa  590  1e-167  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal  0.173455 
 
 
-
 
NC_013174  Jden_2244  extracellular solute-binding protein family 1  60.22 
 
 
455 aa  535  1e-151  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.846858 
 
 
-
 
NC_009664  Krad_0297  extracellular solute-binding protein family 1  48.43 
 
 
453 aa  414  1e-114  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0248346 
 
 
-
 
NC_011886  Achl_2663  extracellular solute-binding protein family 1  45.3 
 
 
468 aa  346  5e-94  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_29870  carbohydrate-binding protein  45.52 
 
 
448 aa  342  1e-92  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12848  sn-glycerol-3-phosphate-binding lipoprotein ugpB  42.32 
 
 
436 aa  330  4e-89  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000142723  normal 
 
 
-
 
NC_008541  Arth_2948  extracellular solute-binding protein  43.76 
 
 
448 aa  328  1.0000000000000001e-88  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2195  extracellular solute-binding protein family 1  38.27 
 
 
450 aa  292  8e-78  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4566  extracellular solute-binding protein  39.14 
 
 
453 aa  268  2e-70  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0113  extracellular solute-binding protein  38.38 
 
 
455 aa  266  8e-70  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.270734  normal 
 
 
-
 
NC_014158  Tpau_3527  extracellular solute-binding protein family 1  39.25 
 
 
436 aa  257  3e-67  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  35 
 
 
448 aa  254  2.0000000000000002e-66  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1508  extracellular solute-binding protein family 1  33.97 
 
 
451 aa  216  5e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.55774  normal 
 
 
-
 
NC_013172  Bfae_30840  ABC-type sugar transport system, periplasmic component  29.43 
 
 
463 aa  177  5e-43  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1527  extracellular solute-binding protein family 1  31.09 
 
 
465 aa  169  1e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.922727  normal  0.377984 
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  27.64 
 
 
445 aa  145  1e-33  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.22 
 
 
458 aa  131  2.0000000000000002e-29  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.22 
 
 
458 aa  131  3e-29  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  27.1 
 
 
439 aa  130  4.0000000000000003e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25 
 
 
458 aa  129  8.000000000000001e-29  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  25 
 
 
458 aa  129  1.0000000000000001e-28  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25 
 
 
458 aa  129  1.0000000000000001e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25 
 
 
458 aa  129  1.0000000000000001e-28  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  25 
 
 
458 aa  129  1.0000000000000001e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25 
 
 
458 aa  129  1.0000000000000001e-28  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  24.28 
 
 
458 aa  127  5e-28  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  28.93 
 
 
441 aa  124  2e-27  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  24.69 
 
 
458 aa  123  9e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03302  glycerol-3-phosphate transporter subunit  27.72 
 
 
438 aa  116  7.999999999999999e-25  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0262  extracellular solute-binding protein family 1  27.72 
 
 
438 aa  116  7.999999999999999e-25  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4767  glycerol-3-phosphate transporter periplasmic binding protein  27.72 
 
 
438 aa  116  7.999999999999999e-25  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.552805 
 
 
-
 
NC_010468  EcolC_0263  glycerol-3-phosphate transporter periplasmic binding protein  27.72 
 
 
438 aa  116  7.999999999999999e-25  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_03255  hypothetical protein  27.72 
 
 
438 aa  116  7.999999999999999e-25  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3650  glycerol-3-phosphate transporter periplasmic binding protein  27.72 
 
 
438 aa  116  7.999999999999999e-25  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E3870  glycerol-3-phosphate transporter periplasmic binding protein  27.72 
 
 
438 aa  115  1.0000000000000001e-24  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_3732  glycerol-3-phosphate transporter periplasmic binding protein  27.87 
 
 
438 aa  115  1.0000000000000001e-24  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_3931  glycerol-3-phosphate transporter periplasmic binding protein  27.72 
 
 
438 aa  116  1.0000000000000001e-24  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  27.08 
 
 
462 aa  111  3e-23  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  27.15 
 
 
438 aa  107  3e-22  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  27.15 
 
 
438 aa  107  3e-22  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  27.15 
 
 
438 aa  107  3e-22  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  27.15 
 
 
438 aa  107  4e-22  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  27.75 
 
 
440 aa  107  6e-22  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  27.75 
 
 
439 aa  105  1e-21  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  27.16 
 
 
440 aa  105  2e-21  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0314  glycerol-3-phosphate transporter periplasmic binding protein  27.4 
 
 
444 aa  105  2e-21  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0323  glycerol-3-phosphate transporter periplasmic binding protein  27.4 
 
 
444 aa  105  2e-21  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.839712 
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  26.49 
 
 
444 aa  105  2e-21  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  26.87 
 
 
438 aa  104  4e-21  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA1180  sugar ABC transporter, periplasmic sugar-binding protein, putative  28.08 
 
 
421 aa  103  6e-21  Brucella suis 1330  Bacteria  normal  0.409061  n/a   
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  29.38 
 
 
437 aa  103  6e-21  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  25.68 
 
 
444 aa  102  2e-20  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3492  glycerol-3-phosphate transporter periplasmic binding protein  26.58 
 
 
444 aa  102  2e-20  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  28.76 
 
 
437 aa  102  2e-20  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_012880  Dd703_3861  glycerol-3-phosphate transporter periplasmic binding protein  26.9 
 
 
439 aa  101  2e-20  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0448  glycerol-3-phosphate transporter periplasmic binding protein  28.02 
 
 
441 aa  101  3e-20  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0298  glycerol-3-phosphate transporter periplasmic binding protein  26.92 
 
 
444 aa  100  4e-20  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  26.79 
 
 
431 aa  100  5e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_010159  YpAngola_A3655  glycerol-3-phosphate transporter periplasmic binding protein  26.65 
 
 
439 aa  100  5e-20  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_4045  glycerol-3-phosphate transporter periplasmic binding protein  26.65 
 
 
439 aa  100  5e-20  Dickeya zeae Ech1591  Bacteria  normal  0.661181  n/a   
 
 
-
 
NC_006348  BMA2744  glycerol-3-phosphate transporter periplasmic binding protein  27.2 
 
 
441 aa  100  6e-20  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3726  glycerol-3-phosphate transporter periplasmic binding protein  27.2 
 
 
441 aa  100  6e-20  Burkholderia pseudomallei 1710b  Bacteria  normal  0.268589  n/a   
 
 
-
 
NC_008060  Bcen_2712  glycerol-3-phosphate transporter periplasmic binding protein  26.37 
 
 
443 aa  100  6e-20  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.290307  n/a   
 
 
-
 
NC_008542  Bcen2424_0395  glycerol-3-phosphate transporter periplasmic binding protein  26.37 
 
 
443 aa  100  6e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  0.954301  n/a   
 
 
-
 
NC_009708  YpsIP31758_0256  glycerol-3-phosphate transporter periplasmic binding protein  26.65 
 
 
439 aa  100  6e-20  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3209  glycerol-3-phosphate transporter periplasmic binding protein  27.2 
 
 
441 aa  100  6e-20  Burkholderia mallei SAVP1  Bacteria  normal  0.0248662  n/a   
 
 
-
 
NC_008836  BMA10229_A1760  glycerol-3-phosphate transporter periplasmic binding protein  27.2 
 
 
441 aa  100  6e-20  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2794  glycerol-3-phosphate transporter periplasmic binding protein  27.2 
 
 
441 aa  100  6e-20  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0374  glycerol-3-phosphate transporter periplasmic binding protein  26.37 
 
 
444 aa  100  6e-20  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_3962  glycerol-3-phosphate transporter periplasmic binding protein  26.65 
 
 
439 aa  100  6e-20  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1666  extracellular solute-binding protein  26.85 
 
 
421 aa  100  7e-20  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2709  glycerol-3-phosphate transporter periplasmic binding protein  27.03 
 
 
441 aa  99.8  9e-20  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  27.3 
 
 
441 aa  99.4  1e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3021  glycerol-3-phosphate transporter periplasmic binding protein  26.92 
 
 
441 aa  99.4  1e-19  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2173  extracellular solute-binding protein family 1  26.98 
 
 
445 aa  99.8  1e-19  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00822083  n/a   
 
 
-
 
NC_010681  Bphyt_3509  glycerol-3-phosphate transporter periplasmic binding protein  27.2 
 
 
441 aa  98.6  2e-19  Burkholderia phytofirmans PsJN  Bacteria  normal  0.839022  normal  0.0272066 
 
 
-
 
NC_009076  BURPS1106A_3755  glycerol-3-phosphate transporter periplasmic binding protein  27.2 
 
 
441 aa  99  2e-19  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  26.05 
 
 
435 aa  97.8  4e-19  Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  27.78 
 
 
431 aa  97.4  5e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008783  BARBAKC583_0349  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  26.03 
 
 
441 aa  96.7  7e-19  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  26.92 
 
 
441 aa  97.1  7e-19  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0791  extracellular solute-binding protein family 1  24.65 
 
 
437 aa  96.3  1e-18  Acidovorax ebreus TPSY  Bacteria  normal  0.721808  n/a   
 
 
-
 
NC_009616  Tmel_0270  extracellular solute-binding protein  24.65 
 
 
419 aa  96.3  1e-18  Thermosipho melanesiensis BI429  Bacteria  normal  0.562219  n/a   
 
 
-
 
NC_012917  PC1_1881  extracellular solute-binding protein family 1  27.25 
 
 
445 aa  95.5  2e-18  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000340671  n/a   
 
 
-
 
NC_008782  Ajs_0862  extracellular solute-binding protein  24.42 
 
 
437 aa  95.5  2e-18  Acidovorax sp. JS42  Bacteria  normal  normal  0.597127 
 
 
-
 
NC_009953  Sare_0747  extracellular solute-binding protein  26.58 
 
 
433 aa  92.8  1e-17  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00190936 
 
 
-
 
NC_012852  Rleg_6261  extracellular solute-binding protein family 1  25.28 
 
 
428 aa  92.8  1e-17  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.689417 
 
 
-
 
NC_010483  TRQ2_0340  extracellular solute-binding protein  24.58 
 
 
419 aa  92.4  1e-17  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1155  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  26.63 
 
 
434 aa  92.4  1e-17  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0097  extracellular solute-binding protein  26.58 
 
 
434 aa  92.4  2e-17  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  29.12 
 
 
452 aa  92  2e-17  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  24.46 
 
 
437 aa  92  2e-17  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  24.38 
 
 
414 aa  91.3  3e-17  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0714  ABC transporter substrate-binding protein  26.33 
 
 
429 aa  91.7  3e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4664  extracellular solute-binding protein  26.48 
 
 
448 aa  90.9  4e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.593429 
 
 
-
 
NC_009486  Tpet_0322  extracellular solute-binding protein  24.3 
 
 
419 aa  91.3  4e-17  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_3710  extracellular solute-binding protein  25.34 
 
 
431 aa  91.3  4e-17  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00279907  normal 
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  26.8 
 
 
425 aa  90.9  5e-17  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_004311  BRA0655  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  24.94 
 
 
433 aa  90.1  7e-17  Brucella suis 1330  Bacteria  normal  0.454035  n/a   
 
 
-
 
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