More than 300 homologs were found in PanDaTox collection
for query gene Tmel_0270 on replicon NC_009616
Organism: Thermosipho melanesiensis BI429



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010483  TRQ2_0340  extracellular solute-binding protein  75.89 
 
 
419 aa  678    Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0322  extracellular solute-binding protein  76.61 
 
 
419 aa  694    Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0270  extracellular solute-binding protein  100 
 
 
419 aa  857    Thermosipho melanesiensis BI429  Bacteria  normal  0.562219  n/a   
 
 
-
 
NC_009718  Fnod_0188  extracellular solute-binding protein  68.74 
 
 
420 aa  620  1e-176  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1068  extracellular solute-binding protein  44.12 
 
 
429 aa  350  3e-95  Petrotoga mobilis SJ95  Bacteria  normal  0.501776  n/a   
 
 
-
 
NC_008530  LGAS_1638  ABC-type sugar transport system, periplasmic component  30.26 
 
 
434 aa  182  1e-44  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.0000325816  normal 
 
 
-
 
NC_013171  Apre_0255  extracellular solute-binding protein family 1  29.32 
 
 
439 aa  173  5.999999999999999e-42  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2049  extracellular solute-binding protein family 1  30.4 
 
 
438 aa  166  5.9999999999999996e-40  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.266449  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  31.49 
 
 
445 aa  165  2.0000000000000002e-39  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  28.86 
 
 
436 aa  152  7e-36  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_008530  LGAS_1846  ABC-type sugar transport system, periplasmic component  28.96 
 
 
442 aa  151  2e-35  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00000328949  hitchhiker  0.000299807 
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  30.12 
 
 
441 aa  147  4.0000000000000006e-34  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2535  extracellular solute-binding protein family 1  29.75 
 
 
418 aa  145  2e-33  Meiothermus ruber DSM 1279  Bacteria  normal  0.105932  normal 
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  27.93 
 
 
437 aa  144  3e-33  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  27.93 
 
 
437 aa  143  7e-33  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_014212  Mesil_2057  extracellular solute-binding protein family 1  29.68 
 
 
421 aa  141  1.9999999999999998e-32  Meiothermus silvanus DSM 9946  Bacteria  normal  0.112802  normal  0.296802 
 
 
-
 
NC_014212  Mesil_0475  extracellular solute-binding protein family 1  27.59 
 
 
397 aa  140  4.999999999999999e-32  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  26.9 
 
 
437 aa  139  7.999999999999999e-32  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_013946  Mrub_2730  extracellular solute-binding protein family 1  25.19 
 
 
399 aa  138  2e-31  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  28.78 
 
 
440 aa  136  6.0000000000000005e-31  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0791  extracellular solute-binding protein family 1  26.46 
 
 
399 aa  135  1.9999999999999998e-30  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.418273 
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  25.34 
 
 
437 aa  134  1.9999999999999998e-30  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  28.64 
 
 
439 aa  133  5e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  31.61 
 
 
444 aa  132  9e-30  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_013131  Caci_2418  extracellular solute-binding protein family 1  28.49 
 
 
447 aa  131  2.0000000000000002e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  27.21 
 
 
435 aa  132  2.0000000000000002e-29  Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  28.37 
 
 
414 aa  127  4.0000000000000003e-28  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0631  extracellular solute-binding protein family 1  28.57 
 
 
435 aa  127  4.0000000000000003e-28  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.79 
 
 
458 aa  126  6e-28  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  25.54 
 
 
462 aa  126  8.000000000000001e-28  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  28.54 
 
 
458 aa  125  1e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.54 
 
 
458 aa  125  1e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.54 
 
 
458 aa  125  1e-27  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013421  Pecwa_0845  extracellular solute-binding protein family 1  27.07 
 
 
435 aa  125  1e-27  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  28.57 
 
 
458 aa  125  2e-27  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.54 
 
 
458 aa  125  2e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  28.57 
 
 
458 aa  125  2e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.54 
 
 
458 aa  125  2e-27  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  28.28 
 
 
458 aa  125  2e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  29.61 
 
 
448 aa  123  8e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.54 
 
 
458 aa  122  9.999999999999999e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  25.81 
 
 
431 aa  120  4.9999999999999996e-26  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  26.35 
 
 
431 aa  119  9.999999999999999e-26  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_014212  Mesil_0476  extracellular solute-binding protein family 1  23.68 
 
 
401 aa  118  1.9999999999999998e-25  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  25.32 
 
 
431 aa  118  1.9999999999999998e-25  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  25.18 
 
 
441 aa  118  1.9999999999999998e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  26.35 
 
 
431 aa  117  3.9999999999999997e-25  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  26.5 
 
 
425 aa  117  5e-25  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_009457  VC0395_A1155  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  25.23 
 
 
434 aa  114  2.0000000000000002e-24  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0604  extracellular solute-binding protein  25.34 
 
 
433 aa  114  5e-24  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00010036 
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  25.63 
 
 
435 aa  113  7.000000000000001e-24  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  24.94 
 
 
444 aa  107  4e-22  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_008010  Dgeo_2662  extracellular solute-binding protein  24.88 
 
 
433 aa  107  4e-22  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.377519  n/a   
 
 
-
 
NC_007802  Jann_2075  extracellular solute-binding protein  23.47 
 
 
433 aa  106  8e-22  Jannaschia sp. CCS1  Bacteria  normal  0.114781  normal  0.235936 
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  26.51 
 
 
402 aa  106  1e-21  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  24.43 
 
 
431 aa  105  2e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_18880  carbohydrate-binding protein  24.86 
 
 
460 aa  103  4e-21  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal  0.173455 
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  25 
 
 
461 aa  103  5e-21  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  23.28 
 
 
452 aa  103  7e-21  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_012848  Rleg_5204  extracellular solute-binding protein family 1  24.29 
 
 
440 aa  102  1e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.306263 
 
 
-
 
NC_010465  YPK_3962  glycerol-3-phosphate transporter periplasmic binding protein  24.88 
 
 
439 aa  102  1e-20  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0256  glycerol-3-phosphate transporter periplasmic binding protein  24.88 
 
 
439 aa  102  1e-20  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  24.11 
 
 
444 aa  102  2e-20  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1508  extracellular solute-binding protein family 1  26.04 
 
 
451 aa  101  3e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.55774  normal 
 
 
-
 
NC_010159  YpAngola_A3655  glycerol-3-phosphate transporter periplasmic binding protein  25.31 
 
 
439 aa  101  3e-20  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2791  extracellular solute-binding protein family 1  26.3 
 
 
402 aa  100  4e-20  Meiothermus ruber DSM 1279  Bacteria  normal  0.448693  normal 
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  23.43 
 
 
440 aa  100  6e-20  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  25.87 
 
 
438 aa  100  7e-20  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  25.87 
 
 
438 aa  100  7e-20  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  25.87 
 
 
438 aa  100  7e-20  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  25.87 
 
 
438 aa  99.8  8e-20  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  23.75 
 
 
444 aa  99.4  1e-19  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3861  glycerol-3-phosphate transporter periplasmic binding protein  23.7 
 
 
439 aa  99  1e-19  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3276  extracellular solute-binding protein family 1  23.3 
 
 
420 aa  99  2e-19  Cyanothece sp. PCC 7425  Bacteria  normal  0.147153  normal  0.336546 
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  25.64 
 
 
438 aa  98.6  2e-19  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06396  ABC-type sugar transport system periplasmic protein  26.11 
 
 
435 aa  97.8  3e-19  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008044  TM1040_0849  extracellular solute-binding protein  22.66 
 
 
434 aa  98.2  3e-19  Ruegeria sp. TM1040  Bacteria  normal  0.0177782  normal 
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  25.77 
 
 
466 aa  97.1  5e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0894  extracellular solute-binding protein family 1  25.45 
 
 
470 aa  96.7  7e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.444762  normal  0.144357 
 
 
-
 
NC_012912  Dd1591_4045  glycerol-3-phosphate transporter periplasmic binding protein  23.59 
 
 
439 aa  96.7  8e-19  Dickeya zeae Ech1591  Bacteria  normal  0.661181  n/a   
 
 
-
 
NC_011988  Avi_5507  ABC transporter substrate binding protein (glycerol 3-phosphate)  24.07 
 
 
447 aa  95.5  1e-18  Agrobacterium vitis S4  Bacteria  normal  0.0724145  n/a   
 
 
-
 
NC_008060  Bcen_2712  glycerol-3-phosphate transporter periplasmic binding protein  24.74 
 
 
443 aa  95.9  1e-18  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.290307  n/a   
 
 
-
 
NC_008542  Bcen2424_0395  glycerol-3-phosphate transporter periplasmic binding protein  24.74 
 
 
443 aa  95.9  1e-18  Burkholderia cenocepacia HI2424  Bacteria  normal  0.954301  n/a   
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  24.6 
 
 
439 aa  95.9  1e-18  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_010508  Bcenmc03_0374  glycerol-3-phosphate transporter periplasmic binding protein  24.74 
 
 
444 aa  96.3  1e-18  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4001  extracellular solute-binding protein family 1  23.6 
 
 
442 aa  94.7  3e-18  Variovorax paradoxus S110  Bacteria  normal  0.131149  n/a   
 
 
-
 
NC_008709  Ping_2093  glycerol-3-phosphate ABC transporter extracellular solute-binding family 1 protein  23.58 
 
 
435 aa  94.7  3e-18  Psychromonas ingrahamii 37  Bacteria  normal  0.107678  normal  0.487826 
 
 
-
 
NC_012912  Dd1591_4133  extracellular solute-binding protein family 1  27.82 
 
 
426 aa  94  4e-18  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3492  glycerol-3-phosphate transporter periplasmic binding protein  24.49 
 
 
444 aa  93.6  6e-18  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0297  extracellular solute-binding protein family 1  25.48 
 
 
453 aa  92.4  1e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0248346 
 
 
-
 
NC_010498  EcSMS35_3732  glycerol-3-phosphate transporter periplasmic binding protein  24.39 
 
 
438 aa  92.4  1e-17  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  23.94 
 
 
436 aa  92.4  1e-17  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_010084  Bmul_0298  glycerol-3-phosphate transporter periplasmic binding protein  24.14 
 
 
444 aa  91.7  2e-17  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2738  extracellular solute-binding protein  24.82 
 
 
438 aa  92  2e-17  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.345118  n/a   
 
 
-
 
NC_010551  BamMC406_0323  glycerol-3-phosphate transporter periplasmic binding protein  23.71 
 
 
444 aa  91.3  3e-17  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.839712 
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  23.41 
 
 
441 aa  91.7  3e-17  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3650  glycerol-3-phosphate transporter periplasmic binding protein  24.39 
 
 
438 aa  90.5  4e-17  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_30840  ABC-type sugar transport system, periplasmic component  24.53 
 
 
463 aa  90.9  4e-17  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0354  ABC transporter substrate binding protein (sn-glycerol 3-phosphate)  22.17 
 
 
432 aa  90.9  4e-17  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_0263  glycerol-3-phosphate transporter periplasmic binding protein  24.39 
 
 
438 aa  90.5  4e-17  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
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