More than 300 homologs were found in PanDaTox collection
for query gene Mrub_2791 on replicon NC_013946
Organism: Meiothermus ruber DSM 1279



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013946  Mrub_2791  extracellular solute-binding protein family 1  100 
 
 
402 aa  802    Meiothermus ruber DSM 1279  Bacteria  normal  0.448693  normal 
 
 
-
 
NC_013946  Mrub_2730  extracellular solute-binding protein family 1  65.99 
 
 
399 aa  545  1e-154  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0476  extracellular solute-binding protein family 1  59.3 
 
 
401 aa  496  1e-139  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0791  extracellular solute-binding protein family 1  48.59 
 
 
399 aa  357  9.999999999999999e-98  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.418273 
 
 
-
 
NC_014212  Mesil_0475  extracellular solute-binding protein family 1  47.56 
 
 
397 aa  350  2e-95  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  28.37 
 
 
441 aa  135  9e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0322  extracellular solute-binding protein  24.15 
 
 
419 aa  129  9.000000000000001e-29  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0340  extracellular solute-binding protein  24.69 
 
 
419 aa  125  1e-27  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  24.93 
 
 
440 aa  119  7e-26  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  24.93 
 
 
435 aa  119  7.999999999999999e-26  Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_009718  Fnod_0188  extracellular solute-binding protein  24.15 
 
 
420 aa  119  9e-26  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  25.31 
 
 
425 aa  112  9e-24  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  24.77 
 
 
436 aa  111  2.0000000000000002e-23  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_009616  Tmel_0270  extracellular solute-binding protein  26.3 
 
 
419 aa  110  5e-23  Thermosipho melanesiensis BI429  Bacteria  normal  0.562219  n/a   
 
 
-
 
NC_013421  Pecwa_0845  extracellular solute-binding protein family 1  25.2 
 
 
435 aa  109  8.000000000000001e-23  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  22.63 
 
 
431 aa  108  1e-22  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_012917  PC1_0631  extracellular solute-binding protein family 1  24.66 
 
 
435 aa  108  2e-22  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  24.15 
 
 
431 aa  107  3e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  25.83 
 
 
437 aa  107  4e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  22.82 
 
 
431 aa  107  4e-22  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3983  extracellular solute-binding protein family 1  27.74 
 
 
456 aa  105  1e-21  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  24.35 
 
 
452 aa  104  3e-21  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_012669  Bcav_1508  extracellular solute-binding protein family 1  26.76 
 
 
451 aa  102  8e-21  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.55774  normal 
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  23.6 
 
 
431 aa  102  1e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  24.15 
 
 
444 aa  101  3e-20  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  23 
 
 
441 aa  100  4e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2535  extracellular solute-binding protein family 1  26.21 
 
 
418 aa  99.4  1e-19  Meiothermus ruber DSM 1279  Bacteria  normal  0.105932  normal 
 
 
-
 
NC_009921  Franean1_3944  extracellular solute-binding protein  27.97 
 
 
464 aa  98.2  2e-19  Frankia sp. EAN1pec  Bacteria  normal  0.920276  normal  0.0416082 
 
 
-
 
NC_008528  OEOE_1459  ABC-type sugar transport system, periplasmic component  24.29 
 
 
457 aa  98.2  2e-19  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  24.07 
 
 
441 aa  98.2  2e-19  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1017  extracellular solute-binding protein  25.37 
 
 
417 aa  98.6  2e-19  Thermosipho melanesiensis BI429  Bacteria  normal  0.0416471  n/a   
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  25.26 
 
 
420 aa  97.4  4e-19  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_007651  BTH_I3021  glycerol-3-phosphate transporter periplasmic binding protein  24.03 
 
 
441 aa  96.7  6e-19  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  22.74 
 
 
431 aa  95.9  1e-18  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_006348  BMA2744  glycerol-3-phosphate transporter periplasmic binding protein  24.07 
 
 
441 aa  95.9  1e-18  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3726  glycerol-3-phosphate transporter periplasmic binding protein  24.07 
 
 
441 aa  95.9  1e-18  Burkholderia pseudomallei 1710b  Bacteria  normal  0.268589  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3209  glycerol-3-phosphate transporter periplasmic binding protein  24.07 
 
 
441 aa  95.9  1e-18  Burkholderia mallei SAVP1  Bacteria  normal  0.0248662  n/a   
 
 
-
 
NC_008836  BMA10229_A1760  glycerol-3-phosphate transporter periplasmic binding protein  24.07 
 
 
441 aa  95.9  1e-18  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2794  glycerol-3-phosphate transporter periplasmic binding protein  24.07 
 
 
441 aa  95.9  1e-18  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2418  extracellular solute-binding protein family 1  24.1 
 
 
447 aa  95.9  1e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2057  extracellular solute-binding protein family 1  24.62 
 
 
421 aa  93.6  5e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  0.112802  normal  0.296802 
 
 
-
 
NC_009076  BURPS1106A_3755  glycerol-3-phosphate transporter periplasmic binding protein  24.07 
 
 
441 aa  93.6  5e-18  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  23.39 
 
 
440 aa  92.8  9e-18  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_010682  Rpic_1092  extracellular solute-binding protein family 1  22.72 
 
 
438 aa  92.4  1e-17  Ralstonia pickettii 12J  Bacteria  normal  0.0503452  normal 
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  26.03 
 
 
435 aa  92.8  1e-17  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1185  extracellular solute-binding protein family 1  22.72 
 
 
438 aa  92  1e-17  Ralstonia pickettii 12D  Bacteria  normal  0.276437  normal 
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  24.38 
 
 
414 aa  92.8  1e-17  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  23.15 
 
 
444 aa  92  2e-17  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1155  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  24.08 
 
 
434 aa  91.7  2e-17  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2052  extracellular solute-binding protein  23.29 
 
 
438 aa  90.5  5e-17  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1068  extracellular solute-binding protein  24.8 
 
 
429 aa  89.7  8e-17  Petrotoga mobilis SJ95  Bacteria  normal  0.501776  n/a   
 
 
-
 
NC_010465  YPK_3962  glycerol-3-phosphate transporter periplasmic binding protein  22.48 
 
 
439 aa  89.7  8e-17  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0256  glycerol-3-phosphate transporter periplasmic binding protein  22.48 
 
 
439 aa  89.7  8e-17  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03302  glycerol-3-phosphate transporter subunit  23.36 
 
 
438 aa  89.4  1e-16  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0262  extracellular solute-binding protein family 1  23.36 
 
 
438 aa  89.4  1e-16  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03255  hypothetical protein  23.36 
 
 
438 aa  89.4  1e-16  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E3870  glycerol-3-phosphate transporter periplasmic binding protein  23.83 
 
 
438 aa  89.4  1e-16  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3650  glycerol-3-phosphate transporter periplasmic binding protein  23.36 
 
 
438 aa  89.4  1e-16  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_0263  glycerol-3-phosphate transporter periplasmic binding protein  23.36 
 
 
438 aa  89.4  1e-16  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_4767  glycerol-3-phosphate transporter periplasmic binding protein  23.36 
 
 
438 aa  89.4  1e-16  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.552805 
 
 
-
 
NC_003295  RSc1264  glycerol-3-phosphate-binding periplasmic lipoprotein signal peptide  23.82 
 
 
438 aa  88.2  2e-16  Ralstonia solanacearum GMI1000  Bacteria  normal  0.400828  normal  0.517414 
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  25.51 
 
 
466 aa  88.2  2e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3276  extracellular solute-binding protein family 1  24.94 
 
 
420 aa  88.2  2e-16  Cyanothece sp. PCC 7425  Bacteria  normal  0.147153  normal  0.336546 
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  24.42 
 
 
422 aa  88.6  2e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009801  EcE24377A_3931  glycerol-3-phosphate transporter periplasmic binding protein  23.13 
 
 
438 aa  88.6  2e-16  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_3732  glycerol-3-phosphate transporter periplasmic binding protein  22.72 
 
 
438 aa  88.6  2e-16  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4664  extracellular solute-binding protein  25.93 
 
 
448 aa  87.8  3e-16  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.593429 
 
 
-
 
NC_007948  Bpro_0857  extracellular solute-binding protein  24.29 
 
 
437 aa  87.8  3e-16  Polaromonas sp. JS666  Bacteria  normal  normal  0.221606 
 
 
-
 
NC_013205  Aaci_2049  extracellular solute-binding protein family 1  23.72 
 
 
438 aa  87.4  4e-16  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.266449  n/a   
 
 
-
 
NC_010159  YpAngola_A3655  glycerol-3-phosphate transporter periplasmic binding protein  22.25 
 
 
439 aa  87  5e-16  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0203  extracellular solute-binding protein family 1  25 
 
 
441 aa  86.7  7e-16  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.346278  normal  0.123927 
 
 
-
 
NC_007908  Rfer_1287  extracellular solute-binding protein  25.56 
 
 
435 aa  86.7  7e-16  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  22.76 
 
 
439 aa  86.3  9e-16  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_007510  Bcep18194_A3492  glycerol-3-phosphate transporter periplasmic binding protein  22.97 
 
 
444 aa  86.3  9e-16  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2738  extracellular solute-binding protein  25 
 
 
438 aa  85.9  0.000000000000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.345118  n/a   
 
 
-
 
NC_008010  Dgeo_2662  extracellular solute-binding protein  25.12 
 
 
433 aa  85.9  0.000000000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.377519  n/a   
 
 
-
 
NC_010622  Bphy_2709  glycerol-3-phosphate transporter periplasmic binding protein  22.55 
 
 
441 aa  85.9  0.000000000000001  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  24.24 
 
 
444 aa  85.1  0.000000000000002  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_008060  Bcen_2712  glycerol-3-phosphate transporter periplasmic binding protein  22.72 
 
 
443 aa  85.1  0.000000000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.290307  n/a   
 
 
-
 
NC_008542  Bcen2424_0395  glycerol-3-phosphate transporter periplasmic binding protein  22.72 
 
 
443 aa  85.1  0.000000000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  0.954301  n/a   
 
 
-
 
NC_008698  Tpen_1453  extracellular solute-binding protein  23.17 
 
 
415 aa  85.5  0.000000000000002  Thermofilum pendens Hrk 5  Archaea  normal  0.0104666  n/a   
 
 
-
 
NC_010508  Bcenmc03_0374  glycerol-3-phosphate transporter periplasmic binding protein  22.72 
 
 
444 aa  85.1  0.000000000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4134  extracellular solute-binding protein family 1  24.23 
 
 
437 aa  84.7  0.000000000000002  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5274  extracellular solute-binding protein family 1  23.28 
 
 
442 aa  84.7  0.000000000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  24.62 
 
 
407 aa  84.3  0.000000000000004  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_007951  Bxe_A0448  glycerol-3-phosphate transporter periplasmic binding protein  22.74 
 
 
441 aa  84  0.000000000000005  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  23.35 
 
 
448 aa  84  0.000000000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  23.86 
 
 
458 aa  83.6  0.000000000000006  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  23.94 
 
 
437 aa  83.6  0.000000000000006  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  22.88 
 
 
438 aa  82.8  0.000000000000009  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  23.61 
 
 
458 aa  82.4  0.00000000000001  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0849  extracellular solute-binding protein  22.03 
 
 
434 aa  82.4  0.00000000000001  Ruegeria sp. TM1040  Bacteria  normal  0.0177782  normal 
 
 
-
 
NC_010681  Bphyt_3509  glycerol-3-phosphate transporter periplasmic binding protein  22.51 
 
 
441 aa  82.8  0.00000000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.839022  normal  0.0272066 
 
 
-
 
NC_013205  Aaci_0770  extracellular solute-binding protein family 1  24.34 
 
 
444 aa  82.4  0.00000000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  23.86 
 
 
458 aa  82.8  0.00000000000001  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  23.61 
 
 
458 aa  81.6  0.00000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  22.88 
 
 
438 aa  81.6  0.00000000000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_4045  glycerol-3-phosphate transporter periplasmic binding protein  21.65 
 
 
439 aa  81.6  0.00000000000002  Dickeya zeae Ech1591  Bacteria  normal  0.661181  n/a   
 
 
-
 
NC_008390  Bamb_0314  glycerol-3-phosphate transporter periplasmic binding protein  22.74 
 
 
444 aa  81.6  0.00000000000002  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  23.61 
 
 
458 aa  81.6  0.00000000000002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
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