More than 300 homologs were found in PanDaTox collection
for query gene Mrub_2535 on replicon NC_013946
Organism: Meiothermus ruber DSM 1279



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014212  Mesil_2057  extracellular solute-binding protein family 1  88.94 
 
 
421 aa  752    Meiothermus silvanus DSM 9946  Bacteria  normal  0.112802  normal  0.296802 
 
 
-
 
NC_013946  Mrub_2535  extracellular solute-binding protein family 1  100 
 
 
418 aa  848    Meiothermus ruber DSM 1279  Bacteria  normal  0.105932  normal 
 
 
-
 
NC_009718  Fnod_0188  extracellular solute-binding protein  28.25 
 
 
420 aa  148  2.0000000000000003e-34  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0322  extracellular solute-binding protein  28.88 
 
 
419 aa  145  2e-33  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0270  extracellular solute-binding protein  29.75 
 
 
419 aa  144  2e-33  Thermosipho melanesiensis BI429  Bacteria  normal  0.562219  n/a   
 
 
-
 
NC_010483  TRQ2_0340  extracellular solute-binding protein  27.97 
 
 
419 aa  142  9.999999999999999e-33  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2049  extracellular solute-binding protein family 1  31.64 
 
 
438 aa  132  9e-30  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.266449  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  27.15 
 
 
445 aa  130  6e-29  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  27.6 
 
 
458 aa  127  3e-28  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  26.99 
 
 
458 aa  127  4.0000000000000003e-28  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  26.99 
 
 
458 aa  127  4.0000000000000003e-28  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  26.99 
 
 
458 aa  127  4.0000000000000003e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  26.99 
 
 
458 aa  127  4.0000000000000003e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  26.99 
 
 
458 aa  127  4.0000000000000003e-28  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  26.99 
 
 
458 aa  127  4.0000000000000003e-28  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  26.77 
 
 
458 aa  127  4.0000000000000003e-28  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  26.77 
 
 
458 aa  126  9e-28  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  26.77 
 
 
458 aa  125  1e-27  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1068  extracellular solute-binding protein  28.57 
 
 
429 aa  123  6e-27  Petrotoga mobilis SJ95  Bacteria  normal  0.501776  n/a   
 
 
-
 
NC_014212  Mesil_0475  extracellular solute-binding protein family 1  28.39 
 
 
397 aa  118  1.9999999999999998e-25  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0476  extracellular solute-binding protein family 1  28.44 
 
 
401 aa  117  6e-25  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2418  extracellular solute-binding protein family 1  28.32 
 
 
447 aa  115  2.0000000000000002e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008530  LGAS_1638  ABC-type sugar transport system, periplasmic component  28.71 
 
 
434 aa  114  3e-24  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.0000325816  normal 
 
 
-
 
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  26.02 
 
 
431 aa  113  6e-24  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  26.79 
 
 
431 aa  113  6e-24  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  26.28 
 
 
431 aa  112  1.0000000000000001e-23  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  27.78 
 
 
439 aa  111  2.0000000000000002e-23  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  26.86 
 
 
437 aa  111  2.0000000000000002e-23  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_007973  Rmet_2055  extracellular solute-binding protein  28.09 
 
 
436 aa  110  5e-23  Cupriavidus metallidurans CH34  Bacteria  normal  0.822621  normal 
 
 
-
 
NC_013171  Apre_0255  extracellular solute-binding protein family 1  27.85 
 
 
439 aa  109  1e-22  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  25.95 
 
 
431 aa  108  1e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2730  extracellular solute-binding protein family 1  27 
 
 
399 aa  108  1e-22  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0791  extracellular solute-binding protein family 1  27.6 
 
 
399 aa  107  3e-22  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.418273 
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  28.53 
 
 
441 aa  107  3e-22  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  27.43 
 
 
448 aa  106  9e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  27.86 
 
 
440 aa  105  1e-21  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  28.01 
 
 
435 aa  106  1e-21  Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_010002  Daci_5465  extracellular solute-binding protein  27.53 
 
 
434 aa  105  2e-21  Delftia acidovorans SPH-1  Bacteria  normal  0.355429  normal 
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  27.35 
 
 
435 aa  105  2e-21  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  25.56 
 
 
462 aa  104  3e-21  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1846  ABC-type sugar transport system, periplasmic component  28.17 
 
 
442 aa  104  3e-21  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00000328949  hitchhiker  0.000299807 
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  25.95 
 
 
431 aa  104  3e-21  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_009952  Dshi_2014  sn-glycerol-3-phosphate-binding periplasmic protein ugpB precursor  27.45 
 
 
433 aa  104  3e-21  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.167012  hitchhiker  0.0071297 
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  26.7 
 
 
425 aa  103  4e-21  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  26.75 
 
 
414 aa  103  4e-21  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2738  extracellular solute-binding protein  25.74 
 
 
438 aa  102  1e-20  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.345118  n/a   
 
 
-
 
NC_008752  Aave_3650  extracellular solute-binding protein  28.47 
 
 
436 aa  102  1e-20  Acidovorax citrulli AAC00-1  Bacteria  normal  0.144474  normal 
 
 
-
 
NC_008782  Ajs_0862  extracellular solute-binding protein  27.76 
 
 
437 aa  102  1e-20  Acidovorax sp. JS42  Bacteria  normal  normal  0.597127 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  27.16 
 
 
407 aa  102  2e-20  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_011992  Dtpsy_0791  extracellular solute-binding protein family 1  27.76 
 
 
437 aa  101  3e-20  Acidovorax ebreus TPSY  Bacteria  normal  0.721808  n/a   
 
 
-
 
NC_003295  RSc1264  glycerol-3-phosphate-binding periplasmic lipoprotein signal peptide  27.03 
 
 
438 aa  100  6e-20  Ralstonia solanacearum GMI1000  Bacteria  normal  0.400828  normal  0.517414 
 
 
-
 
NC_007347  Reut_A2052  extracellular solute-binding protein  27.12 
 
 
438 aa  100  6e-20  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_1092  extracellular solute-binding protein family 1  26.96 
 
 
438 aa  99  2e-19  Ralstonia pickettii 12J  Bacteria  normal  0.0503452  normal 
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  27.98 
 
 
439 aa  99  2e-19  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  25.58 
 
 
410 aa  97.8  3e-19  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  25.58 
 
 
410 aa  97.8  3e-19  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2351  extracellular solute-binding protein family 1  26.6 
 
 
435 aa  97.4  4e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0456809  normal  0.0969201 
 
 
-
 
NC_012856  Rpic12D_1185  extracellular solute-binding protein family 1  26.72 
 
 
438 aa  97.1  6e-19  Ralstonia pickettii 12D  Bacteria  normal  0.276437  normal 
 
 
-
 
NC_011831  Cagg_2195  extracellular solute-binding protein family 1  25.4 
 
 
450 aa  96.7  7e-19  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_3962  glycerol-3-phosphate transporter periplasmic binding protein  27.56 
 
 
439 aa  96.7  7e-19  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0256  glycerol-3-phosphate transporter periplasmic binding protein  27.56 
 
 
439 aa  96.7  7e-19  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4134  extracellular solute-binding protein family 1  27.66 
 
 
437 aa  95.9  1e-18  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3655  glycerol-3-phosphate transporter periplasmic binding protein  27.32 
 
 
439 aa  94.4  3e-18  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3861  glycerol-3-phosphate transporter periplasmic binding protein  27.74 
 
 
439 aa  94.4  3e-18  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4045  glycerol-3-phosphate transporter periplasmic binding protein  27.98 
 
 
439 aa  94  4e-18  Dickeya zeae Ech1591  Bacteria  normal  0.661181  n/a   
 
 
-
 
NC_011988  Avi_6240  ABC transporter substrate binding protein (maltose)  26.67 
 
 
407 aa  94  4e-18  Agrobacterium vitis S4  Bacteria  normal  0.0994607  n/a   
 
 
-
 
NC_009620  Smed_4644  extracellular solute-binding protein  26.14 
 
 
409 aa  93.2  7e-18  Sinorhizobium medicae WSM419  Bacteria  normal  0.0265502  normal  0.0904039 
 
 
-
 
NC_012858  Rleg_6631  extracellular solute-binding protein family 1  27.27 
 
 
410 aa  93.6  7e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.325237 
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  26.05 
 
 
441 aa  93.2  7e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0845  extracellular solute-binding protein family 1  27.49 
 
 
435 aa  93.2  8e-18  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0604  extracellular solute-binding protein  26.47 
 
 
433 aa  92.8  1e-17  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00010036 
 
 
-
 
NC_012917  PC1_0631  extracellular solute-binding protein family 1  27.2 
 
 
435 aa  92.4  1e-17  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  25.59 
 
 
424 aa  92.8  1e-17  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_011366  Rleg2_5687  extracellular solute-binding protein family 1  27.27 
 
 
401 aa  92  2e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.627079  normal 
 
 
-
 
NC_014158  Tpau_3527  extracellular solute-binding protein family 1  25.36 
 
 
436 aa  91.7  2e-17  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0849  extracellular solute-binding protein  24.57 
 
 
434 aa  91.3  3e-17  Ruegeria sp. TM1040  Bacteria  normal  0.0177782  normal 
 
 
-
 
NC_009620  Smed_3710  extracellular solute-binding protein  26.29 
 
 
431 aa  90.9  3e-17  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00279907  normal 
 
 
-
 
NC_009668  Oant_3750  extracellular solute-binding protein  25.85 
 
 
433 aa  90.5  5e-17  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.316129  n/a   
 
 
-
 
NC_004311  BRA0655  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  26.09 
 
 
433 aa  90.1  7e-17  Brucella suis 1330  Bacteria  normal  0.454035  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  25.6 
 
 
436 aa  89.4  1e-16  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  27.21 
 
 
440 aa  88.2  2e-16  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_009457  VC0395_A1155  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  24.44 
 
 
434 aa  88.2  2e-16  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  27.07 
 
 
438 aa  87.8  3e-16  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  27.16 
 
 
452 aa  88.2  3e-16  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_009664  Krad_0297  extracellular solute-binding protein family 1  25.77 
 
 
453 aa  88.2  3e-16  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0248346 
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  27.07 
 
 
438 aa  87.8  3e-16  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  27.07 
 
 
438 aa  87.8  3e-16  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1287  extracellular solute-binding protein  27.59 
 
 
435 aa  87.4  4e-16  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  26.65 
 
 
444 aa  87  6e-16  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2791  extracellular solute-binding protein family 1  25.82 
 
 
402 aa  87  6e-16  Meiothermus ruber DSM 1279  Bacteria  normal  0.448693  normal 
 
 
-
 
NC_011886  Achl_2663  extracellular solute-binding protein family 1  23.08 
 
 
468 aa  86.3  0.000000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007948  Bpro_0857  extracellular solute-binding protein  26.73 
 
 
437 aa  86.3  0.000000000000001  Polaromonas sp. JS666  Bacteria  normal  normal  0.221606 
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  26.83 
 
 
438 aa  85.9  0.000000000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2244  extracellular solute-binding protein family 1  23.98 
 
 
455 aa  85.5  0.000000000000001  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.846858 
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  23.72 
 
 
461 aa  85.1  0.000000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_011884  Cyan7425_3276  extracellular solute-binding protein family 1  23.19 
 
 
420 aa  85.1  0.000000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.147153  normal  0.336546 
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  26.83 
 
 
438 aa  85.1  0.000000000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  24.64 
 
 
441 aa  85.1  0.000000000000002  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29870  carbohydrate-binding protein  23.21 
 
 
448 aa  85.5  0.000000000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4449  extracellular solute-binding protein  25.06 
 
 
446 aa  84.3  0.000000000000004  Xanthobacter autotrophicus Py2  Bacteria  decreased coverage  0.00843107  normal  0.115126 
 
 
-
 
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