| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5465 |
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| Symbol | |
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| ID | 5751083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6067869 |
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| End bp | 6069173 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641300596 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001566479 |
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| Protein GI | 160900897 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.355429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGA AGCAACTGGC CATGGCAGCC GCGATCGCGG CCACCACCAT CTCGGCACAA
GCCCAAACCG AAATCCAGTG GTGGCACTCG ATGAGCGCAG CCCTGGGCGA CTGGGTGAAC
GACCTGGCCA AGGAGTACAA CGCCAGCCAG ACCCAGTACA AGATCGTGCC GACGTACAAG
GGCCAGTATG ACGAGTCGAT GACGGCCGCC ATCGCCGCGT TCCGCGCCGG CAACGCGCCT
GACATCCTGC AGGTCTTCGA AGTGGGCACG GCCACCATGA TGGCCTCCAA GGGCGCCGTG
GTGCCCGTCA CCAAGGTCAT GAACGACGGC GGCTTCAAGT TCGACCAGGG CGAGTACATC
TCCGCCGTGG CCGGCTACTA CACCGCTCCC AACGGCCAGA TGATGAGCTA CCCGCTCAAC
AGCTCGACCA CCATCTTCTA CTACAACAAG GACGCCTTCA AGAAGGCAGG CCTGGACGAG
AACAAGCCGC CCAAGACCTG GCCCGAAGTG TTCGCCGCCG CCGAAAAGCT CAAGGCCTCG
GGCCACCGCT GCGCACTGAC CACGAGCTGG ATGAGCTGGA CCCAGCTGGA GAGCTTCTCG
CTGTGGCACA ACACCCTGTA CGCGACCAAG AACAACGGCT TTGACGGCAC CGATGCCAAG
CTGGTGTTCA ACTCGCCGCT GCACGTCAAG CATTTCGAGA ACCTGGCCAA GGCCGCCAAG
GATGGCAGCT TCGTCTACAA GGGCCGCGGC AACGTGCCTG ACGCCGCCTT CGCTTCCGGC
GAGTGCGCGA TGATCACCGG CTCCTCCGGC CTGTATGCCC GCGTGGTCAA GGAAGGCAAG
TTCGCCTTCG GCCAGTCCCA ACTGCCCTAC TACGCCGACG TGAAGGGCGC TCCCCAGAAC
ACGGCCATCG GCGGTGCCTC CCTGTGGGTG ATGGCCGGCA AGAGCGCCGA ACGCTACAAG
GGCGTGGCTG ACTTCTTCAA CTTCCTGAAC AACACCAAGA TCCAGGCCGC CAGCCACCAG
CGCACCGGCT ACCTGCCCGT GACCACCGCT GCGTACAAGC TGACCGAGGC TTCGGGCTTC
TACGAAAAGC ATCCCGGCAC CGACACCGCC GTGACGCAGA TGATCCGCAA GACCACCGAC
AAGTCGCGCG GCATCCGCCT GGGCAACTTC GTTCAGATCC GCACCATCAT CGATGAGGAA
ACCGAACAGA TCTGGACTGG CAAGAAGACT CCCCAGCAAG CCCTGGACAC CGCTGTCACC
CGTGGCAACG AGCAACTGGG CCGCTTCGCC CGGGCCAACA AGTAA
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| Protein sequence | MQLKQLAMAA AIAATTISAQ AQTEIQWWHS MSAALGDWVN DLAKEYNASQ TQYKIVPTYK
GQYDESMTAA IAAFRAGNAP DILQVFEVGT ATMMASKGAV VPVTKVMNDG GFKFDQGEYI
SAVAGYYTAP NGQMMSYPLN SSTTIFYYNK DAFKKAGLDE NKPPKTWPEV FAAAEKLKAS
GHRCALTTSW MSWTQLESFS LWHNTLYATK NNGFDGTDAK LVFNSPLHVK HFENLAKAAK
DGSFVYKGRG NVPDAAFASG ECAMITGSSG LYARVVKEGK FAFGQSQLPY YADVKGAPQN
TAIGGASLWV MAGKSAERYK GVADFFNFLN NTKIQAASHQ RTGYLPVTTA AYKLTEASGF
YEKHPGTDTA VTQMIRKTTD KSRGIRLGNF VQIRTIIDEE TEQIWTGKKT PQQALDTAVT
RGNEQLGRFA RANK
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