| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4644 |
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| Symbol | |
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| ID | 5319289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1153481 |
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| End bp | 1154710 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640776442 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001313374 |
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| Protein GI | 150376778 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0265502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0904039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAATCG CTTACAAAGC TACCTGTTTC ACGCTTGCCT TGCTCGGATC GACCGCCCTC
GGCGGCTTTG CCGCACAGGC TGCCGATCAG GAGATCAGCT GGATCTATTG CGGCGACAAG
ATTGATCCGA TCCACGAGAA ATACATCAAG GAATGGGAGG GCAAGAATCC CGGTTGGAAG
GTCACGCCTG AAGTCGTCGG TTGGGCCCAG TGCCAGGACA AGGCGACGAC GCTCGCCGTG
GCCGGCACGC CGGTCGGCAT GGCCTATGTG GGTTCCCGCA CCCTCAAGGA ATTCGCCGAG
AACGAGCTGA TCATCCCGGT TCCAATGACC GAGGAAGAGA AAAAGAGCTA TTACCCGAAC
ATCGTCGAGA CGGTGACCTT CAACGACAAT CAGTGGGGCG TGCCGATCGC CTTTTCGACC
AAGGCGCTCT ACTGGAACAA GGACCTATTC AAGCAGGCGG GCCTCGACCC GGAGACGCCG
CCGAAGAGCT GGGCCGAAGA GATCGCCTTT GCGAAGCAAA TCAAGGAAAA GACCGGAATT
GCAGGTTACG GCCTTCCCGC CAAGACATTC GACAACACGA TGCATCAATT CATGCATTGG
GTTTACACCA ATAACGGCAA GGTTATCGAT GGCGACGAGA TCGTCATGGA CAGCCCGGAA
GTGCTCGCGG CGCTGCAGGC CTACAAGGAC CTTGTGCCCT ATTCTGTCGA AGGGGCGACG
GCCTACGAGC AGAACGAGAT TCGCGCCATT TTCCTCGACG GCAAGGTGGG CATGATCCAG
TCCGGCTCAG GCGCCGCCGC ATTGCTGAAG GATACCAAGA TCAACTGGGG CATCGCGCCG
CTGCCGCTCG GCCCTTCGGC CAAGGGCGAA GGCACGCTCC TCATCACCGA CAGCCTGGCG
ATCTTCCAGG GCACGGGCGT CGAGGAAAAG GCGATCGAGT TTGCCAAGTT CATCACATCT
CCCGGTCCGC AGGGCGAGTA TGAACTGCAG GGAGGCGCAG GGCTGACACC GCTGCGCCCG
TCGCCGATGG TCGATGAGTT CGTAAAGGCC GACCCGTCGT GGAAGCCATT CATCGACGGG
ATCGCCTATG GAGGTCCGGA GCCGCTCTTC AAGGACTACA AGGGCTTCCA GAACGCTATC
ATCGACATGG TCCAGTCGGT CGTGACCGGC AAGTCCGAGC CGGTGGACGC TTTGAAGAAG
GCGGCAGCTG ACATCGAACA GTATAAGTAA
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| Protein sequence | MTIAYKATCF TLALLGSTAL GGFAAQAADQ EISWIYCGDK IDPIHEKYIK EWEGKNPGWK
VTPEVVGWAQ CQDKATTLAV AGTPVGMAYV GSRTLKEFAE NELIIPVPMT EEEKKSYYPN
IVETVTFNDN QWGVPIAFST KALYWNKDLF KQAGLDPETP PKSWAEEIAF AKQIKEKTGI
AGYGLPAKTF DNTMHQFMHW VYTNNGKVID GDEIVMDSPE VLAALQAYKD LVPYSVEGAT
AYEQNEIRAI FLDGKVGMIQ SGSGAAALLK DTKINWGIAP LPLGPSAKGE GTLLITDSLA
IFQGTGVEEK AIEFAKFITS PGPQGEYELQ GGAGLTPLRP SPMVDEFVKA DPSWKPFIDG
IAYGGPEPLF KDYKGFQNAI IDMVQSVVTG KSEPVDALKK AAADIEQYK
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