Gene LGAS_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1638 
Symbol 
ID4439148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1599370 
End bp1600674 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content36% 
IMG OID639673463 
ProductABC-type sugar transport system, periplasmic component 
Protein accessionYP_815371 
Protein GI116630199 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000325816 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCA CTAAAAAATT TGCAGCAGTT GCAGTTGCTG CTTTAGCCCT TGTTGGCACT 
ACTGCTTGCT CAAATTCTAA AAGTAATGAT AGCTCAAGTA GTAAGTCTGC TGATATTCCA
ACTAAGATTA CCAAGAAGAC TACTGTTGTT TTCTGGCATG GTATGACTGG TACTCAAGAA
AAGACTTTAC AAAGCTTGAC TAAGGATTTT GAAAAGAAAA ATCCTAACAT TACTGTTAAG
CTTGAAAACC AAGGCAAGTA CAACGATTTA CAAGCAAAGA TTAACTCAAC TTTGCAATCA
CCAAATAACT TACCTACAAT TACTCAAGCT TATCCTGGCT GGCTATTAAA TGCCGCTAAC
AGCAAACGTT TAGTTGATAT GACCCCTTAC ATTAATAATA GTAAGATTGG TTGGGGTTCA
GCTAAAAAGA GTGATATTCG TGAAGAATTA TTAAAGGGTG CTCAAATTAA GGGGACTCAA
TACGGTATTC CATTTAATAA ATCTGTCGAA ATGTTAACTT ACAACAAGGA TTTGTTAGAC
AAATACGGTG TTAAAGTACC AAAGACTATG TCTGAATTAA AAGCAGCTTC TAAGAAGATC
TACGAAAAGA GTAACCACAA AGTTGTTGGT GCTGGATTTG ACTCACTTTC AAACTACTAT
GTTTTAGGTA TGAAAGATGA AGGCGTAAAC TTCTCTAAGG ATATTAACTT TACTGGATCT
AAGTCTAAGA AAGTAATTAA TTACTATGCT GATGGTATTA AGGATGGTTA CTTTAAGACT
GCTGGTTCAG CTGGATATCT TTCAGGCGAC TTTTCTAACC AAAAGATTGC TATGTTTGTA
GGTACTAGTG CTGGTGAAGG ATTCGTTAAG ATGGGTGTTG GTAACAAGTT CCAATATGGT
GTTGCTCCTC GTCCTTCTAA GTACAACATG CAACAGGGTA CTGATATTTA CATGTTTAAC
AAGGGTACTG CTCAACAAAA GGCAGCTGCC TTCATGTACG TTAAGTACTT GTTAGGTAAA
GACCAACAAT TGACTTGGGC TGATAAGACT GGATACATTC CTGTAACTAA TAAAGTAATT
AATTCTAGTG CTTATAAGAA CTCAACTAAG ACTAAAGTTC CTGCTCAATT AGATAAAGCA
ATGAAGCACT TATACAGTGT TCCTGTAGTT AAGAACAGTA ATGCCGCATA CACTCAATTG
AATTCAATTA TGCAAAACAT CTTTGCACAA GCAAAGAAGG GTCAAAGCTG GAATTCACAG
ATTGATGCTG GTAAGACTAA GTTCCAAAGT GCTTGGAATC AATAA
 
Protein sequence
MKFTKKFAAV AVAALALVGT TACSNSKSND SSSSKSADIP TKITKKTTVV FWHGMTGTQE 
KTLQSLTKDF EKKNPNITVK LENQGKYNDL QAKINSTLQS PNNLPTITQA YPGWLLNAAN
SKRLVDMTPY INNSKIGWGS AKKSDIREEL LKGAQIKGTQ YGIPFNKSVE MLTYNKDLLD
KYGVKVPKTM SELKAASKKI YEKSNHKVVG AGFDSLSNYY VLGMKDEGVN FSKDINFTGS
KSKKVINYYA DGIKDGYFKT AGSAGYLSGD FSNQKIAMFV GTSAGEGFVK MGVGNKFQYG
VAPRPSKYNM QQGTDIYMFN KGTAQQKAAA FMYVKYLLGK DQQLTWADKT GYIPVTNKVI
NSSAYKNSTK TKVPAQLDKA MKHLYSVPVV KNSNAAYTQL NSIMQNIFAQ AKKGQSWNSQ
IDAGKTKFQS AWNQ