Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1638 |
Symbol | |
ID | 4439148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1599370 |
End bp | 1600674 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639673463 |
Product | ABC-type sugar transport system, periplasmic component |
Protein accession | YP_815371 |
Protein GI | 116630199 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000325816 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTCA CTAAAAAATT TGCAGCAGTT GCAGTTGCTG CTTTAGCCCT TGTTGGCACT ACTGCTTGCT CAAATTCTAA AAGTAATGAT AGCTCAAGTA GTAAGTCTGC TGATATTCCA ACTAAGATTA CCAAGAAGAC TACTGTTGTT TTCTGGCATG GTATGACTGG TACTCAAGAA AAGACTTTAC AAAGCTTGAC TAAGGATTTT GAAAAGAAAA ATCCTAACAT TACTGTTAAG CTTGAAAACC AAGGCAAGTA CAACGATTTA CAAGCAAAGA TTAACTCAAC TTTGCAATCA CCAAATAACT TACCTACAAT TACTCAAGCT TATCCTGGCT GGCTATTAAA TGCCGCTAAC AGCAAACGTT TAGTTGATAT GACCCCTTAC ATTAATAATA GTAAGATTGG TTGGGGTTCA GCTAAAAAGA GTGATATTCG TGAAGAATTA TTAAAGGGTG CTCAAATTAA GGGGACTCAA TACGGTATTC CATTTAATAA ATCTGTCGAA ATGTTAACTT ACAACAAGGA TTTGTTAGAC AAATACGGTG TTAAAGTACC AAAGACTATG TCTGAATTAA AAGCAGCTTC TAAGAAGATC TACGAAAAGA GTAACCACAA AGTTGTTGGT GCTGGATTTG ACTCACTTTC AAACTACTAT GTTTTAGGTA TGAAAGATGA AGGCGTAAAC TTCTCTAAGG ATATTAACTT TACTGGATCT AAGTCTAAGA AAGTAATTAA TTACTATGCT GATGGTATTA AGGATGGTTA CTTTAAGACT GCTGGTTCAG CTGGATATCT TTCAGGCGAC TTTTCTAACC AAAAGATTGC TATGTTTGTA GGTACTAGTG CTGGTGAAGG ATTCGTTAAG ATGGGTGTTG GTAACAAGTT CCAATATGGT GTTGCTCCTC GTCCTTCTAA GTACAACATG CAACAGGGTA CTGATATTTA CATGTTTAAC AAGGGTACTG CTCAACAAAA GGCAGCTGCC TTCATGTACG TTAAGTACTT GTTAGGTAAA GACCAACAAT TGACTTGGGC TGATAAGACT GGATACATTC CTGTAACTAA TAAAGTAATT AATTCTAGTG CTTATAAGAA CTCAACTAAG ACTAAAGTTC CTGCTCAATT AGATAAAGCA ATGAAGCACT TATACAGTGT TCCTGTAGTT AAGAACAGTA ATGCCGCATA CACTCAATTG AATTCAATTA TGCAAAACAT CTTTGCACAA GCAAAGAAGG GTCAAAGCTG GAATTCACAG ATTGATGCTG GTAAGACTAA GTTCCAAAGT GCTTGGAATC AATAA
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Protein sequence | MKFTKKFAAV AVAALALVGT TACSNSKSND SSSSKSADIP TKITKKTTVV FWHGMTGTQE KTLQSLTKDF EKKNPNITVK LENQGKYNDL QAKINSTLQS PNNLPTITQA YPGWLLNAAN SKRLVDMTPY INNSKIGWGS AKKSDIREEL LKGAQIKGTQ YGIPFNKSVE MLTYNKDLLD KYGVKVPKTM SELKAASKKI YEKSNHKVVG AGFDSLSNYY VLGMKDEGVN FSKDINFTGS KSKKVINYYA DGIKDGYFKT AGSAGYLSGD FSNQKIAMFV GTSAGEGFVK MGVGNKFQYG VAPRPSKYNM QQGTDIYMFN KGTAQQKAAA FMYVKYLLGK DQQLTWADKT GYIPVTNKVI NSSAYKNSTK TKVPAQLDKA MKHLYSVPVV KNSNAAYTQL NSIMQNIFAQ AKKGQSWNSQ IDAGKTKFQS AWNQ
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