More than 300 homologs were found in PanDaTox collection
for query gene LGAS_1638 on replicon NC_008530
Organism: Lactobacillus gasseri ATCC 33323



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008530  LGAS_1638  ABC-type sugar transport system, periplasmic component  100 
 
 
434 aa  880    Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.0000325816  normal 
 
 
-
 
NC_008530  LGAS_1846  ABC-type sugar transport system, periplasmic component  65.06 
 
 
442 aa  560  1e-158  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00000328949  hitchhiker  0.000299807 
 
 
-
 
NC_013171  Apre_0255  extracellular solute-binding protein family 1  38.97 
 
 
439 aa  318  7.999999999999999e-86  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0270  extracellular solute-binding protein  30.26 
 
 
419 aa  182  1e-44  Thermosipho melanesiensis BI429  Bacteria  normal  0.562219  n/a   
 
 
-
 
NC_010483  TRQ2_0340  extracellular solute-binding protein  32.02 
 
 
419 aa  176  7e-43  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0322  extracellular solute-binding protein  29.59 
 
 
419 aa  174  1.9999999999999998e-42  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0188  extracellular solute-binding protein  28.91 
 
 
420 aa  162  8.000000000000001e-39  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1068  extracellular solute-binding protein  30 
 
 
429 aa  132  9e-30  Petrotoga mobilis SJ95  Bacteria  normal  0.501776  n/a   
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  25.99 
 
 
441 aa  132  1.0000000000000001e-29  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2418  extracellular solute-binding protein family 1  28.98 
 
 
447 aa  118  1.9999999999999998e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  24.63 
 
 
462 aa  117  5e-25  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2057  extracellular solute-binding protein family 1  27.17 
 
 
421 aa  115  1.0000000000000001e-24  Meiothermus silvanus DSM 9946  Bacteria  normal  0.112802  normal  0.296802 
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  29 
 
 
445 aa  116  1.0000000000000001e-24  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.28 
 
 
458 aa  115  1.0000000000000001e-24  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2535  extracellular solute-binding protein family 1  28.71 
 
 
418 aa  114  3e-24  Meiothermus ruber DSM 1279  Bacteria  normal  0.105932  normal 
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.62 
 
 
458 aa  114  3e-24  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.37 
 
 
458 aa  114  5e-24  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  27.37 
 
 
458 aa  112  9e-24  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  27.37 
 
 
458 aa  112  1.0000000000000001e-23  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.37 
 
 
458 aa  112  1.0000000000000001e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.37 
 
 
458 aa  112  1.0000000000000001e-23  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.37 
 
 
458 aa  112  1.0000000000000001e-23  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  27.37 
 
 
458 aa  112  1.0000000000000001e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  30.24 
 
 
439 aa  112  1.0000000000000001e-23  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  25.23 
 
 
423 aa  110  5e-23  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013205  Aaci_2049  extracellular solute-binding protein family 1  28.12 
 
 
438 aa  110  7.000000000000001e-23  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.266449  n/a   
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  25.12 
 
 
437 aa  108  2e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  27.03 
 
 
458 aa  100  4e-20  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_1459  ABC-type sugar transport system, periplasmic component  26.17 
 
 
457 aa  98.6  2e-19  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  24.49 
 
 
419 aa  89  2e-16  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  24.81 
 
 
407 aa  89  2e-16  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  23.43 
 
 
436 aa  88.6  2e-16  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  24.27 
 
 
448 aa  87.4  4e-16  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0770  extracellular solute-binding protein family 1  25.08 
 
 
444 aa  84.3  0.000000000000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  23.65 
 
 
424 aa  84  0.000000000000005  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  23.78 
 
 
437 aa  83.6  0.000000000000006  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_008783  BARBAKC583_0349  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  24.29 
 
 
441 aa  83.2  0.000000000000009  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  22.64 
 
 
437 aa  79.7  0.0000000000001  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  21.58 
 
 
435 aa  79  0.0000000000002  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013202  Hmuk_2515  methyl-accepting chemotaxis sensory transducer  21.47 
 
 
833 aa  77.8  0.0000000000004  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.0891124 
 
 
-
 
NC_010320  Teth514_0753  extracellular solute-binding protein  26.25 
 
 
429 aa  77  0.0000000000005  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00037903  n/a   
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  23.32 
 
 
437 aa  76.6  0.0000000000008  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  24.13 
 
 
432 aa  76.3  0.000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2404  extracellular solute-binding protein family 1  31.41 
 
 
424 aa  76.3  0.000000000001  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000132449  n/a   
 
 
-
 
NC_010717  PXO_00880  ABC transporter sugar binding protein  24.38 
 
 
440 aa  75.5  0.000000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.106592  n/a   
 
 
-
 
NC_013946  Mrub_0791  extracellular solute-binding protein family 1  21.74 
 
 
399 aa  74.3  0.000000000004  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.418273 
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  23.74 
 
 
415 aa  73.9  0.000000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_011886  Achl_2663  extracellular solute-binding protein family 1  24.19 
 
 
468 aa  73.6  0.000000000007  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_2108  extracellular solute-binding protein family 1  25.52 
 
 
430 aa  73.2  0.000000000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.553068 
 
 
-
 
NC_012669  Bcav_1522  extracellular solute-binding protein family 1  21.6 
 
 
421 aa  72.4  0.00000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.569671  normal 
 
 
-
 
NC_007802  Jann_2075  extracellular solute-binding protein  20.6 
 
 
433 aa  71.2  0.00000000003  Jannaschia sp. CCS1  Bacteria  normal  0.114781  normal  0.235936 
 
 
-
 
NC_012669  Bcav_3775  extracellular solute-binding protein family 1  21.82 
 
 
459 aa  70.1  0.00000000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.137854  normal 
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  24.92 
 
 
414 aa  69.7  0.00000000009  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_0734  hypothetical protein  21.95 
 
 
491 aa  69.3  0.0000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.843476  normal 
 
 
-
 
NC_008010  Dgeo_2726  extracellular solute-binding protein  23.14 
 
 
437 aa  69.7  0.0000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.290956  n/a   
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  27.33 
 
 
504 aa  69.3  0.0000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008010  Dgeo_2662  extracellular solute-binding protein  23.21 
 
 
433 aa  68.6  0.0000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.377519  n/a   
 
 
-
 
NC_008010  Dgeo_2821  extracellular solute-binding protein  30.06 
 
 
428 aa  68.6  0.0000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.858803  n/a   
 
 
-
 
NC_014151  Cfla_1126  extracellular solute-binding protein family 1  24.75 
 
 
433 aa  68.9  0.0000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.162135  hitchhiker  0.000581091 
 
 
-
 
NC_014212  Mesil_0475  extracellular solute-binding protein family 1  20.94 
 
 
397 aa  68.2  0.0000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2195  extracellular solute-binding protein family 1  21.23 
 
 
450 aa  67.4  0.0000000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0420  ABC sugar transporter, periplasmic ligand binding protein  24.59 
 
 
410 aa  67.4  0.0000000005  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0265  extracellular solute-binding protein family 1  22.22 
 
 
510 aa  67.4  0.0000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2504  extracellular solute-binding protein family 1  24.38 
 
 
442 aa  67  0.0000000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0637  extracellular solute-binding protein  23.44 
 
 
425 aa  67  0.0000000006  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1155  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  23.21 
 
 
434 aa  66.6  0.0000000008  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12848  sn-glycerol-3-phosphate-binding lipoprotein ugpB  20.76 
 
 
436 aa  66.6  0.0000000008  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000142723  normal 
 
 
-
 
NC_010676  Bphyt_7208  extracellular solute-binding protein family 1  24.58 
 
 
410 aa  66.6  0.0000000009  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_30840  ABC-type sugar transport system, periplasmic component  22.97 
 
 
463 aa  66.6  0.0000000009  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  21.04 
 
 
436 aa  66.6  0.0000000009  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  25.13 
 
 
422 aa  65.9  0.000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010816  BLD_1874  MalE-type ABC sugar transport system periplasmic component  26.44 
 
 
427 aa  65.9  0.000000001  Bifidobacterium longum DJO10A  Bacteria  normal  0.0756635  n/a   
 
 
-
 
NC_007777  Francci3_2252  extracellular solute-binding protein  23.63 
 
 
469 aa  65.9  0.000000001  Frankia sp. CcI3  Bacteria  hitchhiker  0.00844632  hitchhiker  0.0063434 
 
 
-
 
NC_014165  Tbis_1886  extracellular solute-binding protein family 1  25.28 
 
 
435 aa  65.9  0.000000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.23125 
 
 
-
 
NC_003295  RSc1264  glycerol-3-phosphate-binding periplasmic lipoprotein signal peptide  22.32 
 
 
438 aa  65.1  0.000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  0.400828  normal  0.517414 
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  24.79 
 
 
461 aa  65.5  0.000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_012856  Rpic12D_1185  extracellular solute-binding protein family 1  22.92 
 
 
438 aa  65.5  0.000000002  Ralstonia pickettii 12D  Bacteria  normal  0.276437  normal 
 
 
-
 
NC_010682  Rpic_1092  extracellular solute-binding protein family 1  22.92 
 
 
438 aa  65.5  0.000000002  Ralstonia pickettii 12J  Bacteria  normal  0.0503452  normal 
 
 
-
 
NC_007973  Rmet_2055  extracellular solute-binding protein  21.98 
 
 
436 aa  65.5  0.000000002  Cupriavidus metallidurans CH34  Bacteria  normal  0.822621  normal 
 
 
-
 
NC_012669  Bcav_1508  extracellular solute-binding protein family 1  20.7 
 
 
451 aa  65.9  0.000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.55774  normal 
 
 
-
 
NC_013946  Mrub_0045  extracellular solute-binding protein family 1  20.74 
 
 
414 aa  65.1  0.000000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.713374  normal 
 
 
-
 
NC_008698  Tpen_1453  extracellular solute-binding protein  22.22 
 
 
415 aa  64.7  0.000000003  Thermofilum pendens Hrk 5  Archaea  normal  0.0104666  n/a   
 
 
-
 
NC_010816  BLD_1008  MalE-type ABC sugar transport system periplasmic component  28.16 
 
 
449 aa  64.7  0.000000003  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0297  extracellular solute-binding protein family 1  22.64 
 
 
453 aa  64.7  0.000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0248346 
 
 
-
 
NC_010623  Bphy_4057  extracellular solute-binding protein  25.82 
 
 
410 aa  64.3  0.000000004  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3750  extracellular solute-binding protein  24.01 
 
 
433 aa  64.3  0.000000004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.316129  n/a   
 
 
-
 
NC_004311  BRA0655  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  24.64 
 
 
433 aa  63.9  0.000000005  Brucella suis 1330  Bacteria  normal  0.454035  n/a   
 
 
-
 
NC_011071  Smal_2683  extracellular solute-binding protein family 1  20.42 
 
 
446 aa  63.9  0.000000005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.50155  normal 
 
 
-
 
NC_013947  Snas_0203  extracellular solute-binding protein family 1  24.28 
 
 
441 aa  63.9  0.000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.346278  normal  0.123927 
 
 
-
 
NC_010816  BLD_0923  MalE-type ABC sugar transport system periplasmic component  27.17 
 
 
450 aa  63.9  0.000000005  Bifidobacterium longum DJO10A  Bacteria  normal  0.293658  n/a   
 
 
-
 
NC_009654  Mmwyl1_0604  extracellular solute-binding protein  22.19 
 
 
433 aa  63.9  0.000000005  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00010036 
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  22.38 
 
 
444 aa  63.5  0.000000007  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  25.37 
 
 
444 aa  63.2  0.000000008  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_012034  Athe_0399  extracellular solute-binding protein family 1  28.52 
 
 
408 aa  63.2  0.000000008  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.00000000195685  n/a   
 
 
-
 
NC_009921  Franean1_3944  extracellular solute-binding protein  25.07 
 
 
464 aa  63.2  0.000000009  Frankia sp. EAN1pec  Bacteria  normal  0.920276  normal  0.0416082 
 
 
-
 
NC_011898  Ccel_1133  extracellular solute-binding protein family 1  33.12 
 
 
451 aa  63.2  0.000000009  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  24.9 
 
 
431 aa  63.2  0.000000009  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4566  extracellular solute-binding protein  21.1 
 
 
453 aa  63.2  0.000000009  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010513  Xfasm12_1607  ABC transporter sugar-binding protein  22.64 
 
 
430 aa  62.8  0.00000001  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0849  extracellular solute-binding protein  21.39 
 
 
434 aa  62.4  0.00000001  Ruegeria sp. TM1040  Bacteria  normal  0.0177782  normal 
 
 
-
 
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