Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1522 |
Symbol | |
ID | 7859678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1743859 |
End bp | 1745124 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643865607 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002881540 |
Protein GI | 229820014 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.569671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC TCATCAGGGT CGCGGCGCTC GCCGCGGCCG GCGCGCTGAC CCTCGCCGCG TGCGCGAGCG GCGGCGGCGA CGCCGGGGAC GACGGCGGCC AGGCCGGTCC CGTCGAGATC ACGTTCTGGA ACGGCTTCAC CAGCTCCGAC CGCCCGATCG TGGAGCAGCT CGTCGCTGAG TTCAACGACT CCCAGGACGA CTACCGGGTG CGGATGGAGA TCCAGCCCTG GGACACGATG TACTCCAAGC TCATGCCCGC CTACCAGGCC GGCGAGGGGC CGACGCTCGT GGCGATGGAC CCGGCCCGCA CGCCGGCGTA CGTGGAGCGC GGCGTCCTCG CACCCGTCGA CGACTTCTAC GGCGACGGCG CGCTCGACGC GGCCACGCTG CCCGAGGCGA GCCTCGAGGC GAACATGTAC GACGGCGTCC AGTACGGCGT CCCGATGAGC GCGGGCGCCG GGATGCTCTA CTGGAACGCG GACATCTTCG CCGCGGCCGG CATCGAGGGA CCGCCCGAGA CGTGGGCAGA GCTGGCCGAC GTCGCCGTCC AGCTCACCGA GGGCGACCAG TACGGCCTGC CCATCGCCGA CCACGAGGCG CTCTCGCTGT GGCCCACGCT GTTCTGGGCC GACGGCGGCG GCATCTTCAC GGACGACTCG AGCGCCTCGC TCCTGGGCGA CGACGCCACG GTGGCCACCA TGGAGTTCTG GACCGACCTG GTGCAGAACG AGGGCATCTC CCCGGCCGGG CTCTCCGGGG CCGACGCTGA CGCGCTCATG CTCGCCGGGA GCGCCGCGAT GCACATGACC GGGCCGTGGC TGAGCTCCGG GCTCACGGAG GCCGGGATCA ACTGGGAGGT CGCGCCGCTG CCGGCAGGGA CCTCGGGGCA GTTCAGCCCG GCGGTCATCG TCAACATGCA CCTCGACGCG AACGCGACGG ACGCCGAGCG GGAGGCCGCG CGCGCGTTCG TCACGCACTG GAACTCGCCC GAGGCGCAGA CGACGTGGGC GGTCGGGACG TCGTACCCGC CGAACCGCAC GGACATCCCG GCGTCGGACC TGGCCGAGAA CCCGACGTCG GCCGCGTTCA CGGAGGCCAT CGGACCGCGC TTCTACCAGG CCGGGCTGCT CAACTTCGCC GACCTCGACG CGAACGTCGT CACCCCGACG ATCCAGCGCG TCCTCGCCGG TGAGGGCACG GCTGCCGACC TCTTCCCGGA GGCCGCGGAG CAGCTCGACT CCCAGATCGA GACGCTCGGC GAATGA
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Protein sequence | MSKLIRVAAL AAAGALTLAA CASGGGDAGD DGGQAGPVEI TFWNGFTSSD RPIVEQLVAE FNDSQDDYRV RMEIQPWDTM YSKLMPAYQA GEGPTLVAMD PARTPAYVER GVLAPVDDFY GDGALDAATL PEASLEANMY DGVQYGVPMS AGAGMLYWNA DIFAAAGIEG PPETWAELAD VAVQLTEGDQ YGLPIADHEA LSLWPTLFWA DGGGIFTDDS SASLLGDDAT VATMEFWTDL VQNEGISPAG LSGADADALM LAGSAAMHMT GPWLSSGLTE AGINWEVAPL PAGTSGQFSP AVIVNMHLDA NATDAEREAA RAFVTHWNSP EAQTTWAVGT SYPPNRTDIP ASDLAENPTS AAFTEAIGPR FYQAGLLNFA DLDANVVTPT IQRVLAGEGT AADLFPEAAE QLDSQIETLG E
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