Gene Bcav_1522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1522 
Symbol 
ID7859678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1743859 
End bp1745124 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content72% 
IMG OID643865607 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002881540 
Protein GI229820014 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.569671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC TCATCAGGGT CGCGGCGCTC GCCGCGGCCG GCGCGCTGAC CCTCGCCGCG 
TGCGCGAGCG GCGGCGGCGA CGCCGGGGAC GACGGCGGCC AGGCCGGTCC CGTCGAGATC
ACGTTCTGGA ACGGCTTCAC CAGCTCCGAC CGCCCGATCG TGGAGCAGCT CGTCGCTGAG
TTCAACGACT CCCAGGACGA CTACCGGGTG CGGATGGAGA TCCAGCCCTG GGACACGATG
TACTCCAAGC TCATGCCCGC CTACCAGGCC GGCGAGGGGC CGACGCTCGT GGCGATGGAC
CCGGCCCGCA CGCCGGCGTA CGTGGAGCGC GGCGTCCTCG CACCCGTCGA CGACTTCTAC
GGCGACGGCG CGCTCGACGC GGCCACGCTG CCCGAGGCGA GCCTCGAGGC GAACATGTAC
GACGGCGTCC AGTACGGCGT CCCGATGAGC GCGGGCGCCG GGATGCTCTA CTGGAACGCG
GACATCTTCG CCGCGGCCGG CATCGAGGGA CCGCCCGAGA CGTGGGCAGA GCTGGCCGAC
GTCGCCGTCC AGCTCACCGA GGGCGACCAG TACGGCCTGC CCATCGCCGA CCACGAGGCG
CTCTCGCTGT GGCCCACGCT GTTCTGGGCC GACGGCGGCG GCATCTTCAC GGACGACTCG
AGCGCCTCGC TCCTGGGCGA CGACGCCACG GTGGCCACCA TGGAGTTCTG GACCGACCTG
GTGCAGAACG AGGGCATCTC CCCGGCCGGG CTCTCCGGGG CCGACGCTGA CGCGCTCATG
CTCGCCGGGA GCGCCGCGAT GCACATGACC GGGCCGTGGC TGAGCTCCGG GCTCACGGAG
GCCGGGATCA ACTGGGAGGT CGCGCCGCTG CCGGCAGGGA CCTCGGGGCA GTTCAGCCCG
GCGGTCATCG TCAACATGCA CCTCGACGCG AACGCGACGG ACGCCGAGCG GGAGGCCGCG
CGCGCGTTCG TCACGCACTG GAACTCGCCC GAGGCGCAGA CGACGTGGGC GGTCGGGACG
TCGTACCCGC CGAACCGCAC GGACATCCCG GCGTCGGACC TGGCCGAGAA CCCGACGTCG
GCCGCGTTCA CGGAGGCCAT CGGACCGCGC TTCTACCAGG CCGGGCTGCT CAACTTCGCC
GACCTCGACG CGAACGTCGT CACCCCGACG ATCCAGCGCG TCCTCGCCGG TGAGGGCACG
GCTGCCGACC TCTTCCCGGA GGCCGCGGAG CAGCTCGACT CCCAGATCGA GACGCTCGGC
GAATGA
 
Protein sequence
MSKLIRVAAL AAAGALTLAA CASGGGDAGD DGGQAGPVEI TFWNGFTSSD RPIVEQLVAE 
FNDSQDDYRV RMEIQPWDTM YSKLMPAYQA GEGPTLVAMD PARTPAYVER GVLAPVDDFY
GDGALDAATL PEASLEANMY DGVQYGVPMS AGAGMLYWNA DIFAAAGIEG PPETWAELAD
VAVQLTEGDQ YGLPIADHEA LSLWPTLFWA DGGGIFTDDS SASLLGDDAT VATMEFWTDL
VQNEGISPAG LSGADADALM LAGSAAMHMT GPWLSSGLTE AGINWEVAPL PAGTSGQFSP
AVIVNMHLDA NATDAEREAA RAFVTHWNSP EAQTTWAVGT SYPPNRTDIP ASDLAENPTS
AAFTEAIGPR FYQAGLLNFA DLDANVVTPT IQRVLAGEGT AADLFPEAAE QLDSQIETLG
E