Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2108 |
Symbol | |
ID | 8333453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2392296 |
End bp | 2393588 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644955258 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003112868 |
Protein GI | 256391304 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.553068 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGGA AGCGCGGCGC CGCGATTGCG GCGATAGCGG TAGTGGCTCT CGCTGCAAGT GCTTGCAGCA GCAGCAAGTC GGGTGGCTCC TCGGCCGCCG CCAAGGATCC GGGCTCGGTG AAGGGGAGCG TCACCTGGTG GGACACCTCT GATGCCACCA ATGAGGCGCC GAACTACCAG CCGATCATCA AGGCGTTCGA GGCCAAGTAC CCGAACATCA AGGTGAACTA CGTCAACGTG CCGTTCTCGG ACGCCAAGGA CAAGTTCAAG ACCGCCGCGC AGTCCGGCAG CGGGGCTCCG GACGTGCTGC GCGCGGACGT CGGCTGGACG CCCGCGTTCG CGCAGCTGGG CTACCTGCAG CCGCTGGACG GGACGCCCGC GCTGCAGGAC GCCGCCGACT ACATGCCCGG GCCGTACGCC TCGGACCACT ACAACGGCAA GATTTACGGC GTGCCGCAGG TCACCGACAC GCTCACGCTG CTGTACAACA AGGACCTGCT CACCAAGGCC GGCATCACCA CGCCGCCGAA GACCTGGGCC GAGCTGAAGA GCGACAGCCT GCAGATCAAG GCCAAGACCG GGGTGGACGG CACGTTCCTG GACGCCGCGT CCTACTACCT GCTGCCGTTC ATCTACGGCG AGGGCGGCGA CATCATCGAC GCCTCGGCCA AGAAGATCAC GGTCAACGAC GCGACCACGC TCAAGGCCGT GGGCATCGCG CAGGACCTGG TGAAGTCCGG CGCGGCGGTC ACCGACGTGA CCAAGGACGG CTACACCAAC ATGCAGACCG CCTTCAAGGA CGGCAAGGTC GCCATGGTCA TCAACGGCCC GTGGTCCACC TCCGACGACC TGAAGGGCTC GGCCTTCGGC AGCGCCGACA ACCTCGGCAT CGCCACCGTC CCGGCCGGCT CGGTCAAGGC CGGCGCCCCG GTCGGCGGCC ACAACCTGGT CGTCTACGCG GGCTCGAAGA ACCTCGACGC CACCTACCTG TTCGTGGCGT TCCTGAACGA CGCGCAGAAC CAGGCGACCA TCGCGGCCAA GAACAACGTG CTGCCGACCC GCACCTCGGC CTACTCCGAC CCGCAGGTCG CGAACAACAA GATCCTGTCG GCCTTCGAGG GCCCGCTGAA GAACGCGGTC GGCCGTCCGC CGGTCGCCGG CGCCTCGGAC CTGTTCACCC CGCTGGACAC CGACTACCAG GCGATCCTCG GCGGTCAGAA GAGCGCCCAG GACGGGCTGA ACGACGCCGC GACGCAGTTC GCGCAGATCC TGCCGGACTT CAGCAAGAGC TGA
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Protein sequence | MRRKRGAAIA AIAVVALAAS ACSSSKSGGS SAAAKDPGSV KGSVTWWDTS DATNEAPNYQ PIIKAFEAKY PNIKVNYVNV PFSDAKDKFK TAAQSGSGAP DVLRADVGWT PAFAQLGYLQ PLDGTPALQD AADYMPGPYA SDHYNGKIYG VPQVTDTLTL LYNKDLLTKA GITTPPKTWA ELKSDSLQIK AKTGVDGTFL DAASYYLLPF IYGEGGDIID ASAKKITVND ATTLKAVGIA QDLVKSGAAV TDVTKDGYTN MQTAFKDGKV AMVINGPWST SDDLKGSAFG SADNLGIATV PAGSVKAGAP VGGHNLVVYA GSKNLDATYL FVAFLNDAQN QATIAAKNNV LPTRTSAYSD PQVANNKILS AFEGPLKNAV GRPPVAGASD LFTPLDTDYQ AILGGQKSAQ DGLNDAATQF AQILPDFSKS
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