| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2404 |
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| Symbol | |
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| ID | 8326593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2663250 |
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| End bp | 2664524 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644942949 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003100190 |
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| Protein GI | 256376530 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000132449 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTAA CCCGAGCACT GGCCGCCGCA GCGGCGCTCT CCCTGCTCGC GTCCTGCGGA
GGCCCGGCTG CCCCGCAGGA GCCCACCGGC CCGATCACCC TCACCTGGTG GCACAACGGC
ACCTCCGACC CGATCAAGAC GGTCTGGCAG GACGTCGTCA CCGACTACCA GGGCAAGAAC
CCGGACATCA CGATCGAGGC CCAGCCCATC CAGAACGAGG GCTTCTCCAC CAAGATCCCC
CTGGCGCTCC AGTCGCCCAC CCCGCCGGAC GTCTACCAGC AGTGGGGCGG CGGCGACCTG
GCCTCGCAGG TCACCTCCGG CAAGCTCGCC GACATCACCG ACGCGAGCAA GCCGTGGATC
TCCACCATCG GCGACTTCGC CAAGGGCTGG CAGGTCGACG GCCGCCAGCT CGGCGTCCCG
TTCGCCCAGC ACGTCGTGGG CTTCTGGTAC CGCAAGGACC TGTTCTCCCA GGCCGGGATC
AGCGCCCCGC CCACCACGAT GGCCGAGCTG AACGCCGCCG TCGCCAAGCT CAAGTCCGCC
GGGCTCGCCC CGATCGCCGT CGGCGGCAAG GACCGCTGGC CGGACGCCTT CTACTGGAAC
TACTTCGCCG TCCGCGAGTG CTCGCAGCAG ACCATCGAGT CCTCGGTGAA GAACCTCAAG
CTCGACGACC CGTGCTGGGT CAAGGCGGGC CAGGACCTGG TGGACTTCCT GCGGACCGAG
CCGTTCCAGG AGGGCTTCAA CGGCACCCCC GCCCAGCAGG GCGCGGGCAG CTCGGCGGGC
CTGGTGGCCA ACGGCAAGGC CGCCATGGAG CTGCAGGGCG ACTGGAACCC CGGCACCATG
TCCTCCCTCA CCGAGGACAA GGACCTGGAC AGCAAGGTCG GCTGGTTCCC GTTCCCGACC
GTCCCCGGTG GCCAGGGCGA CCCGGCGGCC GTGCTCGGCG GCGGTGACGG CTTCTCCTGC
ACCACCCGCG CGGCAGCCGC CTGCGCGAAG TTCCTGGAGT ACCTGATCGG CCCGGAGATC
CAGAACAAGC TCGCCGCCGC GGGCACCGGC CTGCCGGTCA ACGAGGCCGC CGTCACCGCG
CTCAAGACCG AGAACCTCAA GACCGTCGCC GAGCACGGCC GCAATGCGCC GTACGTGCAG
ATGTACTTCG ACCGGGCCTT CCCGACCGAC GTGGGCGCCG CGCTGAACGA GGCCGTCGCG
AACCTGTTCG CGGGCCAGGG CTCGCCTCAG GGCATCGTCG ACGCGGTCAA CGAGGCGGCG
GACGGGGCGA AGTGA
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| Protein sequence | MRLTRALAAA AALSLLASCG GPAAPQEPTG PITLTWWHNG TSDPIKTVWQ DVVTDYQGKN
PDITIEAQPI QNEGFSTKIP LALQSPTPPD VYQQWGGGDL ASQVTSGKLA DITDASKPWI
STIGDFAKGW QVDGRQLGVP FAQHVVGFWY RKDLFSQAGI SAPPTTMAEL NAAVAKLKSA
GLAPIAVGGK DRWPDAFYWN YFAVRECSQQ TIESSVKNLK LDDPCWVKAG QDLVDFLRTE
PFQEGFNGTP AQQGAGSSAG LVANGKAAME LQGDWNPGTM SSLTEDKDLD SKVGWFPFPT
VPGGQGDPAA VLGGGDGFSC TTRAAAACAK FLEYLIGPEI QNKLAAAGTG LPVNEAAVTA
LKTENLKTVA EHGRNAPYVQ MYFDRAFPTD VGAALNEAVA NLFAGQGSPQ GIVDAVNEAA
DGAK
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