| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2075 |
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| Symbol | |
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| ID | 3934528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2082950 |
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| End bp | 2084251 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904431 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_510017 |
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| Protein GI | 89054566 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.114781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.235936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTTA AGAACACAAT CGGCGCAGGC CTTGCATTCG GCCTTTTGGC CGGAGCGGCT
CAGGCGCAGA CCGAAATCGA ATGGTGGCAC GCGATGGGCG GCCAGCTGGG TGAGACCGTC
AACCAGATGG CGGAAAACTT CAACGCGAGC CAGGGTGACT ATGTCATCAC GCCCGTCTTC
AAAGGCACCT ATGAAGAGAC GCTGACCGCT GCCATCGCCG CCTTCCGCGC GGGCGAGCAG
CCCAACATCG TGCAGGTCTT CGATGCGGGT GCCGCGACGG TCATCGGCGC ACAGGGCGCG
ACCATCCCGG TGGAGCAGCT TTTGTCCGAG AACGGCGTTG ATTTCGACCG TGAGGATTAC
ATCTCGGGCG TGCGCAACTT CTATGCCGAC GCCGATGGCC AGATGATCGG CATGCCGTTC
AACTCCTCCA CGCCGATCAT GTACTACAAC GCCGATGCCC TGGAGGCCGC GGGTGTTGAG
CCGCCCGCCA CCTGGGAAGA ATTTGCCGAA GTCACAGCGC CCGCGCTGGC GGAAGCGGGC
TATGTGCCGC TGGCCCAGTC GCACCTGCCG TGGATCTTTA CCGAGAATTT CTTCTCGCGC
CACAACCTGC AGTTCGCGTC CAACGACAAT GGCTACACCG GCACCGATAC CGAGATCATG
GTCAACCACC CCGCCATCCG CGCGCATTTC ACCGCGCTGA CCGAATGGCA GGAGGCGGGC
TATTTTGAAT GGTACGGCAC CGGTTGGGCC GACAACCAGG ACCCCTTTGA AGCGGGCGAA
GTGGCCATGT GGCTCGGGTC TTCGGGCTCG TTCGGTGGCA TCGCCGACCG CGTTGACTTC
AACTTCTCCG CCGCCATGCT GCCTTATTGG GAAGCCGTGA CGACCGAGCC CACGCAGACC
TTCATCGGGG GCGCGGCTCT GTTCGCGATG TCCGGCTTTG ATGCGGAGCA GAATGAAGCC
ACAGCGGCCT TCTTCGACTT CCTCGACAGC GTCGATGCGC AGGTCATGTG GCACACGGAA
ACGGGCTATG TTCCGATCAC GACCGCCGCT TATGAAGCGA CGGCTGAGAC CGGTCACTAC
GACACGTTCC CGGCAGCCGA AGTGGGTGTC CAGCAGCTGC AGCTGCCCGC TGGTGAGTTC
ACCCGCGGCT ACCGCATGGG CTTCTACGTC CAGATCCGTG ACGTGATGAA CCGTGAGTAT
GGCCGCATCC TGACCGGTGA AACCTCCGTC GATGACGCGT TCGAGACGAT CGAAGCGGAG
GCCAACGAGC TTCTGTCGCG CTTCGCCCAG ACGCAGGGCT GA
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| Protein sequence | MNLKNTIGAG LAFGLLAGAA QAQTEIEWWH AMGGQLGETV NQMAENFNAS QGDYVITPVF
KGTYEETLTA AIAAFRAGEQ PNIVQVFDAG AATVIGAQGA TIPVEQLLSE NGVDFDREDY
ISGVRNFYAD ADGQMIGMPF NSSTPIMYYN ADALEAAGVE PPATWEEFAE VTAPALAEAG
YVPLAQSHLP WIFTENFFSR HNLQFASNDN GYTGTDTEIM VNHPAIRAHF TALTEWQEAG
YFEWYGTGWA DNQDPFEAGE VAMWLGSSGS FGGIADRVDF NFSAAMLPYW EAVTTEPTQT
FIGGAALFAM SGFDAEQNEA TAAFFDFLDS VDAQVMWHTE TGYVPITTAA YEATAETGHY
DTFPAAEVGV QQLQLPAGEF TRGYRMGFYV QIRDVMNREY GRILTGETSV DDAFETIEAE
ANELLSRFAQ TQG
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