Gene PXO_00880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00880 
Symbol 
ID6305958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp2488448 
End bp2489770 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content64% 
IMG OID642639722 
ProductABC transporter sugar binding protein 
Protein accessionYP_001913582 
Protein GI188576653 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.106592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGGAT GCGAACGCGC CGATCCGGGC AAGACCACGG TGCGTTTCTG GGCGATGGGC 
AAGGAGGCCG AAGTGGTCGC CGAGCTGGTG GCCGACTTCG AAAAGCACAA CCCCACGATC
CACGTGGATG TGCAGAACAT CCCGATGACC GCGGCGCACG AAAAACTGCT CACCGCCTTC
GCCGCCGATG GCCTGCCGGA TGTGTGCCAA CTCGGTAACA CCTGGTTGCC GGAGTTCGCG
CTGCTGGACA CGCTGGAGCC GATGCAGCCC TACGTGGCGC GCTCCAGGAT CGTCGACCCA
GCCGATTATT TCCCCGGCGT GTGGGACACC AATTTGGTCG ATGGCACGTT GTACGGCGTG
CCGTGGTATG TGGACACGCG CCTGCTGTTC TATCGCAAGG ATCTGCTACG CGAGGCCGGC
TACCGCGAAA TGCCCAAGAC CTGGGCCGAG ATGGAGCAGG TGATGGCGGC GATCAAGCGC
AAGGTCGGCC CCGACCGCTT CGCCATCCTG ATGCCGCTCA ACGAATTCGA GCAGCAACTG
TCGTTCGCGC TGCAGCAGGA CGACCGCCTG CTGCGCGACC ACGACAACTA CGGCAACTTC
CGTGGTGCCG GCTTCCGCAA GGCGCTGGGC TTCTACGACA ACATGTATCA AAAAGGCTGG
GCACCGAAGG TCTCCGAGAC CCAGGTGTCC AACGTCTGGT ACGAATTCTT CAACGGCTAT
TACGCGTTCT ATCTGTCCGG GCCGTGGAAC GTGCGCGAAT TCAAGCTGCG CCAGCCACAG
GGCATGGAAG GCCAGTGGGG CACCGCGCCG TTGCCGGGCC CCAATGGCCT GGGTGCCGGC
ATTGCCGGCG GCTCCAGCCT GGTGATCTTC AAGTCCTCGC AACACAAGCA GGCCAGCTGG
AAGCTGATCG AATACCTGTC GCAGCCGCAG GTGCAGGCGC GTTTCCACGC CATCATCGGC
GACCTGCCGC CGCGTCGCAG TCCCTGGAAG TTGCCTTCGC TGGCCAACGA CGAATTGGCG
CATGCCTTCG GCGACCAGCT GGAGCGGGTC AAGGCCACGC CCAAGGTGCT GGAGTGGGAG
CGCATCGTGC AGGAAATGCG TCTGGTGACC GAGCGTGTGG TACGTGGTGG CCAATCGCAC
GAAGCCGCCG TGCAGGAACT GGATAAACGC GTGGACGAGA TCCTGGCCAA GCGCCGCTGG
ATCTTCGCGC AGGAGGGTGG GCATGTGGGC CCGGCCGGTG AGACGGCTAC GCAGGCTGTA
ACGCCGGCTG CTGCGGACAC CACCGCGCCA GCTGCCGCAG CGCACCAGGG AGTCGCACGA
TGA
 
Protein sequence
MAGCERADPG KTTVRFWAMG KEAEVVAELV ADFEKHNPTI HVDVQNIPMT AAHEKLLTAF 
AADGLPDVCQ LGNTWLPEFA LLDTLEPMQP YVARSRIVDP ADYFPGVWDT NLVDGTLYGV
PWYVDTRLLF YRKDLLREAG YREMPKTWAE MEQVMAAIKR KVGPDRFAIL MPLNEFEQQL
SFALQQDDRL LRDHDNYGNF RGAGFRKALG FYDNMYQKGW APKVSETQVS NVWYEFFNGY
YAFYLSGPWN VREFKLRQPQ GMEGQWGTAP LPGPNGLGAG IAGGSSLVIF KSSQHKQASW
KLIEYLSQPQ VQARFHAIIG DLPPRRSPWK LPSLANDELA HAFGDQLERV KATPKVLEWE
RIVQEMRLVT ERVVRGGQSH EAAVQELDKR VDEILAKRRW IFAQEGGHVG PAGETATQAV
TPAAADTTAP AAAAHQGVAR