| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00880 |
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| Symbol | |
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| ID | 6305958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 2488448 |
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| End bp | 2489770 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642639722 |
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| Product | ABC transporter sugar binding protein |
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| Protein accession | YP_001913582 |
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| Protein GI | 188576653 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.106592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGGGAT GCGAACGCGC CGATCCGGGC AAGACCACGG TGCGTTTCTG GGCGATGGGC
AAGGAGGCCG AAGTGGTCGC CGAGCTGGTG GCCGACTTCG AAAAGCACAA CCCCACGATC
CACGTGGATG TGCAGAACAT CCCGATGACC GCGGCGCACG AAAAACTGCT CACCGCCTTC
GCCGCCGATG GCCTGCCGGA TGTGTGCCAA CTCGGTAACA CCTGGTTGCC GGAGTTCGCG
CTGCTGGACA CGCTGGAGCC GATGCAGCCC TACGTGGCGC GCTCCAGGAT CGTCGACCCA
GCCGATTATT TCCCCGGCGT GTGGGACACC AATTTGGTCG ATGGCACGTT GTACGGCGTG
CCGTGGTATG TGGACACGCG CCTGCTGTTC TATCGCAAGG ATCTGCTACG CGAGGCCGGC
TACCGCGAAA TGCCCAAGAC CTGGGCCGAG ATGGAGCAGG TGATGGCGGC GATCAAGCGC
AAGGTCGGCC CCGACCGCTT CGCCATCCTG ATGCCGCTCA ACGAATTCGA GCAGCAACTG
TCGTTCGCGC TGCAGCAGGA CGACCGCCTG CTGCGCGACC ACGACAACTA CGGCAACTTC
CGTGGTGCCG GCTTCCGCAA GGCGCTGGGC TTCTACGACA ACATGTATCA AAAAGGCTGG
GCACCGAAGG TCTCCGAGAC CCAGGTGTCC AACGTCTGGT ACGAATTCTT CAACGGCTAT
TACGCGTTCT ATCTGTCCGG GCCGTGGAAC GTGCGCGAAT TCAAGCTGCG CCAGCCACAG
GGCATGGAAG GCCAGTGGGG CACCGCGCCG TTGCCGGGCC CCAATGGCCT GGGTGCCGGC
ATTGCCGGCG GCTCCAGCCT GGTGATCTTC AAGTCCTCGC AACACAAGCA GGCCAGCTGG
AAGCTGATCG AATACCTGTC GCAGCCGCAG GTGCAGGCGC GTTTCCACGC CATCATCGGC
GACCTGCCGC CGCGTCGCAG TCCCTGGAAG TTGCCTTCGC TGGCCAACGA CGAATTGGCG
CATGCCTTCG GCGACCAGCT GGAGCGGGTC AAGGCCACGC CCAAGGTGCT GGAGTGGGAG
CGCATCGTGC AGGAAATGCG TCTGGTGACC GAGCGTGTGG TACGTGGTGG CCAATCGCAC
GAAGCCGCCG TGCAGGAACT GGATAAACGC GTGGACGAGA TCCTGGCCAA GCGCCGCTGG
ATCTTCGCGC AGGAGGGTGG GCATGTGGGC CCGGCCGGTG AGACGGCTAC GCAGGCTGTA
ACGCCGGCTG CTGCGGACAC CACCGCGCCA GCTGCCGCAG CGCACCAGGG AGTCGCACGA
TGA
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| Protein sequence | MAGCERADPG KTTVRFWAMG KEAEVVAELV ADFEKHNPTI HVDVQNIPMT AAHEKLLTAF
AADGLPDVCQ LGNTWLPEFA LLDTLEPMQP YVARSRIVDP ADYFPGVWDT NLVDGTLYGV
PWYVDTRLLF YRKDLLREAG YREMPKTWAE MEQVMAAIKR KVGPDRFAIL MPLNEFEQQL
SFALQQDDRL LRDHDNYGNF RGAGFRKALG FYDNMYQKGW APKVSETQVS NVWYEFFNGY
YAFYLSGPWN VREFKLRQPQ GMEGQWGTAP LPGPNGLGAG IAGGSSLVIF KSSQHKQASW
KLIEYLSQPQ VQARFHAIIG DLPPRRSPWK LPSLANDELA HAFGDQLERV KATPKVLEWE
RIVQEMRLVT ERVVRGGQSH EAAVQELDKR VDEILAKRRW IFAQEGGHVG PAGETATQAV
TPAAADTTAP AAAAHQGVAR
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