More than 300 homologs were found in PanDaTox collection
for query gene LGAS_1846 on replicon NC_008530
Organism: Lactobacillus gasseri ATCC 33323



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008530  LGAS_1846  ABC-type sugar transport system, periplasmic component  100 
 
 
442 aa  901    Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00000328949  hitchhiker  0.000299807 
 
 
-
 
NC_008530  LGAS_1638  ABC-type sugar transport system, periplasmic component  67.42 
 
 
434 aa  562  1.0000000000000001e-159  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.0000325816  normal 
 
 
-
 
NC_013171  Apre_0255  extracellular solute-binding protein family 1  41.39 
 
 
439 aa  314  1.9999999999999998e-84  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0340  extracellular solute-binding protein  29.76 
 
 
419 aa  162  8.000000000000001e-39  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0322  extracellular solute-binding protein  29.22 
 
 
419 aa  159  8e-38  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0270  extracellular solute-binding protein  29.38 
 
 
419 aa  155  2e-36  Thermosipho melanesiensis BI429  Bacteria  normal  0.562219  n/a   
 
 
-
 
NC_009718  Fnod_0188  extracellular solute-binding protein  29.22 
 
 
420 aa  150  6e-35  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  26.27 
 
 
441 aa  133  6.999999999999999e-30  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1068  extracellular solute-binding protein  28.77 
 
 
429 aa  123  8e-27  Petrotoga mobilis SJ95  Bacteria  normal  0.501776  n/a   
 
 
-
 
NC_013205  Aaci_2049  extracellular solute-binding protein family 1  30.56 
 
 
438 aa  118  1.9999999999999998e-25  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.266449  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  28.15 
 
 
445 aa  116  6.9999999999999995e-25  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2057  extracellular solute-binding protein family 1  28.33 
 
 
421 aa  116  7.999999999999999e-25  Meiothermus silvanus DSM 9946  Bacteria  normal  0.112802  normal  0.296802 
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  29.21 
 
 
458 aa  115  1.0000000000000001e-24  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.87 
 
 
458 aa  115  2.0000000000000002e-24  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  28.61 
 
 
458 aa  113  6e-24  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.61 
 
 
458 aa  113  6e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.61 
 
 
458 aa  113  6e-24  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  28.61 
 
 
458 aa  113  6e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  28.35 
 
 
458 aa  113  7.000000000000001e-24  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.35 
 
 
458 aa  113  8.000000000000001e-24  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.61 
 
 
458 aa  112  9e-24  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  26.46 
 
 
439 aa  112  1.0000000000000001e-23  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_2418  extracellular solute-binding protein family 1  27.76 
 
 
447 aa  111  3e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  25.06 
 
 
437 aa  107  4e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  24.67 
 
 
462 aa  106  7e-22  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2535  extracellular solute-binding protein family 1  27.02 
 
 
418 aa  104  3e-21  Meiothermus ruber DSM 1279  Bacteria  normal  0.105932  normal 
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  23.66 
 
 
437 aa  100  6e-20  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  27.22 
 
 
458 aa  100  7e-20  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  24.55 
 
 
407 aa  95.9  1e-18  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  22.88 
 
 
437 aa  93.2  9e-18  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_008528  OEOE_1459  ABC-type sugar transport system, periplasmic component  22.69 
 
 
457 aa  92.8  1e-17  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2662  extracellular solute-binding protein  24.71 
 
 
433 aa  88.2  2e-16  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.377519  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  23.12 
 
 
436 aa  87.4  4e-16  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  25 
 
 
423 aa  87.8  4e-16  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  25.79 
 
 
415 aa  87  6e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  23.62 
 
 
437 aa  86.7  7e-16  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0476  extracellular solute-binding protein family 1  22.65 
 
 
401 aa  84.7  0.000000000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_2093  glycerol-3-phosphate ABC transporter extracellular solute-binding family 1 protein  24.71 
 
 
435 aa  84.3  0.000000000000004  Psychromonas ingrahamii 37  Bacteria  normal  0.107678  normal  0.487826 
 
 
-
 
NC_009784  VIBHAR_06396  ABC-type sugar transport system periplasmic protein  23.21 
 
 
435 aa  82.8  0.00000000000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_1522  extracellular solute-binding protein family 1  22.09 
 
 
421 aa  80.9  0.00000000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.569671  normal 
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  25 
 
 
414 aa  80.1  0.00000000000007  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008783  BARBAKC583_0349  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  24.21 
 
 
441 aa  79.7  0.00000000000009  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0791  extracellular solute-binding protein family 1  21.8 
 
 
399 aa  79.3  0.0000000000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.418273 
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  23.12 
 
 
424 aa  79.3  0.0000000000001  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_010717  PXO_00880  ABC transporter sugar binding protein  22.97 
 
 
440 aa  78.6  0.0000000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.106592  n/a   
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  25.43 
 
 
461 aa  78.6  0.0000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_014151  Cfla_1126  extracellular solute-binding protein family 1  25.43 
 
 
433 aa  78.6  0.0000000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.162135  hitchhiker  0.000581091 
 
 
-
 
NC_014212  Mesil_0475  extracellular solute-binding protein family 1  21.78 
 
 
397 aa  79  0.0000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  22.98 
 
 
425 aa  77.4  0.0000000000004  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_007973  Rmet_2055  extracellular solute-binding protein  22.8 
 
 
436 aa  77.4  0.0000000000005  Cupriavidus metallidurans CH34  Bacteria  normal  0.822621  normal 
 
 
-
 
NC_013946  Mrub_0045  extracellular solute-binding protein family 1  23.36 
 
 
414 aa  76.6  0.0000000000009  Meiothermus ruber DSM 1279  Bacteria  normal  0.713374  normal 
 
 
-
 
NC_011981  Avi_7590  ABC transporter substrate binding protein (sugar)  24.36 
 
 
447 aa  75.9  0.000000000001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1874  MalE-type ABC sugar transport system periplasmic component  27.14 
 
 
427 aa  75.5  0.000000000002  Bifidobacterium longum DJO10A  Bacteria  normal  0.0756635  n/a   
 
 
-
 
NC_011884  Cyan7425_3276  extracellular solute-binding protein family 1  22.74 
 
 
420 aa  75.5  0.000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.147153  normal  0.336546 
 
 
-
 
NC_009457  VC0395_A1155  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  25 
 
 
434 aa  75.5  0.000000000002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  21.36 
 
 
466 aa  74.7  0.000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  24.85 
 
 
438 aa  74.7  0.000000000003  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  24.85 
 
 
438 aa  74.7  0.000000000003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  24.85 
 
 
438 aa  74.7  0.000000000003  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  24.85 
 
 
438 aa  74.7  0.000000000003  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0770  extracellular solute-binding protein family 1  24.46 
 
 
444 aa  74.3  0.000000000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_2515  methyl-accepting chemotaxis sensory transducer  22.07 
 
 
833 aa  73.9  0.000000000005  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.0891124 
 
 
-
 
NC_008010  Dgeo_2726  extracellular solute-binding protein  22.87 
 
 
437 aa  73.6  0.000000000006  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.290956  n/a   
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  23.16 
 
 
448 aa  73.9  0.000000000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_0734  hypothetical protein  22.55 
 
 
491 aa  73.6  0.000000000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.843476  normal 
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  22.99 
 
 
431 aa  73.2  0.000000000009  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  24.55 
 
 
438 aa  72.8  0.00000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  23.54 
 
 
435 aa  72.8  0.00000000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_3931  glycerol-3-phosphate transporter periplasmic binding protein  25.15 
 
 
438 aa  72.8  0.00000000001  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03302  glycerol-3-phosphate transporter subunit  24.85 
 
 
438 aa  72  0.00000000002  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0262  extracellular solute-binding protein family 1  24.85 
 
 
438 aa  72  0.00000000002  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  21.49 
 
 
436 aa  72  0.00000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_012892  B21_03255  hypothetical protein  24.85 
 
 
438 aa  72  0.00000000002  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3650  glycerol-3-phosphate transporter periplasmic binding protein  24.85 
 
 
438 aa  72  0.00000000002  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_1092  extracellular solute-binding protein family 1  22.85 
 
 
438 aa  72  0.00000000002  Ralstonia pickettii 12J  Bacteria  normal  0.0503452  normal 
 
 
-
 
NC_012856  Rpic12D_1185  extracellular solute-binding protein family 1  22.85 
 
 
438 aa  72.4  0.00000000002  Ralstonia pickettii 12D  Bacteria  normal  0.276437  normal 
 
 
-
 
NC_010498  EcSMS35_3732  glycerol-3-phosphate transporter periplasmic binding protein  24.85 
 
 
438 aa  71.6  0.00000000002  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_0263  glycerol-3-phosphate transporter periplasmic binding protein  24.85 
 
 
438 aa  72  0.00000000002  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_4767  glycerol-3-phosphate transporter periplasmic binding protein  24.85 
 
 
438 aa  72  0.00000000002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.552805 
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  25.65 
 
 
504 aa  72  0.00000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010658  SbBS512_E3870  glycerol-3-phosphate transporter periplasmic binding protein  24.85 
 
 
438 aa  71.6  0.00000000003  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  23.14 
 
 
431 aa  71.6  0.00000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1264  glycerol-3-phosphate-binding periplasmic lipoprotein signal peptide  21.79 
 
 
438 aa  71.2  0.00000000004  Ralstonia solanacearum GMI1000  Bacteria  normal  0.400828  normal  0.517414 
 
 
-
 
NC_009654  Mmwyl1_0604  extracellular solute-binding protein  20.9 
 
 
433 aa  70.9  0.00000000004  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00010036 
 
 
-
 
NC_013421  Pecwa_2173  extracellular solute-binding protein family 1  25.66 
 
 
445 aa  70.5  0.00000000006  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00822083  n/a   
 
 
-
 
NC_011886  Achl_2663  extracellular solute-binding protein family 1  22.42 
 
 
468 aa  70.1  0.00000000008  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009667  Oant_0637  extracellular solute-binding protein  24.61 
 
 
425 aa  69.7  0.00000000009  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  21.78 
 
 
431 aa  68.9  0.0000000001  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  25.06 
 
 
444 aa  69.3  0.0000000001  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_010320  Teth514_0753  extracellular solute-binding protein  24.37 
 
 
429 aa  68.9  0.0000000001  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00037903  n/a   
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  23.55 
 
 
432 aa  69.7  0.0000000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2719  extracellular solute-binding protein family 1  23.7 
 
 
434 aa  68.9  0.0000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.233137 
 
 
-
 
NC_013235  Namu_0514  extracellular solute-binding protein family 1  24.46 
 
 
426 aa  69.7  0.0000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  24.54 
 
 
411 aa  68.9  0.0000000002  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_013174  Jden_2072  extracellular solute-binding protein family 1  27.22 
 
 
431 aa  68.9  0.0000000002  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.0000000238529  normal 
 
 
-
 
NC_009664  Krad_0297  extracellular solute-binding protein family 1  24 
 
 
453 aa  68.9  0.0000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0248346 
 
 
-
 
NC_013526  Tter_2659  extracellular solute-binding protein family 1  30.72 
 
 
495 aa  67.4  0.0000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0361435  n/a   
 
 
-
 
NC_011071  Smal_2683  extracellular solute-binding protein family 1  21.6 
 
 
446 aa  67.8  0.0000000004  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.50155  normal 
 
 
-
 
NC_010184  BcerKBAB4_2799  extracellular solute-binding protein  23.67 
 
 
453 aa  67.4  0.0000000005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.357786  n/a   
 
 
-
 
NC_013093  Amir_2404  extracellular solute-binding protein family 1  24.32 
 
 
424 aa  67.4  0.0000000005  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000132449  n/a   
 
 
-
 
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