Gene Bcav_2719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2719 
Symbol 
ID7860157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3022410 
End bp3023714 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content72% 
IMG OID643866816 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002882726 
Protein GI229821200 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.233137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACC CCACGCGAAT GGCGTCCGCC GTGGCGCTCG GAGCGAGCAT CGCCCTCCTG 
GCCGCCGCGT GCAGCGGCGG ATCGGACGAG GGCAGCACCG GCGAGGCGAG CGAGGGCGCC
GACGTCACCC TGACCTGGTG GCACAACTCC AACAACGAGC CCGGCCGCGG CTTCTACGAG
CAGGCCGCCG CCGACTACGA GGCCGACCAT CCCGGCGTCA CGATCGAGAT CCAGGCCCTC
CAGCACGAGG ACATGCTCAC GAAGCTGGAC GCGGCCTTCC AGACCGGCGA CACCCCGGAC
GTCTACATGG AGCGGGGCGG CGGCGAGCTC GCCGACCACG TCGAGGCCGA GCTCACCATG
GACCTCACCG ACGTCGCAGC CGACGCGGTC GAGACCGTCG GCGGCTCCGT CGCCGGCTGG
CAGGTGGACG GGCGGACGTA CGCGCTGCCG TTCAGCGTCG GCGTCGTGGG CTTCTGGTAC
AACACGGAAC TCTTCGAGCA GGCCGGGATC ACGGAGGCCC CGACCACGAT GGACGAGTTC
GACGACGCCG TCTCGGCGCT CCGGGACGCT GGCATCGCGC CCGTCTCCGT GGGGGCGGGC
GACCTGTGGC CGGCGGCGCA CTTCTGGTAC TACTTCGCGG TGCGGCAGTG CGCCCAGGAC
GTGCTGAGCG AGGCTGTGAC GTCCCTGGAC TTCTCGGACG AGTGCTTCCT GCGCGCGGGC
GAGGACCTCG AGCACCTGAT CGGGACCGAG CCCTTCAACG AGGGGTTCCT TGCCACGCCC
GCGCAGTCCG GACCGACGAG CGCGTCGGCG CTCCTGGCCA CGGGCCAGGT CGCGATGGAG
CTCGCCGGGC ACTGGGAGCC GGGCGTCATG CAGGGCCTCA CGGAGGACCA GCTGGGACTC
GGCGAGAACA CCGGCTGGTT CCCGTTCCCG CAGGTCGACG GCGGCGAGGG TGACCCCGCG
GCCACGCTCG GCGGCGGCGA CGCGTGGGCC TGCTCCGCCG ACGCCCCGCC CGAGTGCGTG
GACTTCATCT CCTACCTGCT CTCGGACGAC GTGCAGATCG GGTTCGCCGA GAACTCGATG
GGCCTGCCCA CCAACCAGGC GGCGAGCGGC TCCGTCGCCG ACCCGGCGCT CGCCGACCTC
CTGACGGTGC GCGACTCCGC GCCGTACGTC CAGCTCTACC TCGACACGGC GTTCGGCGAG
AACGTGGGCG GGGCCATGAA CGACGCCATC GGCCTCATGT TCGCCGGAGA TGCGTCGCCG
CAGGACATCG TCGACGCCAT CCAGTCGGCC GCCGGCACCG CATGA
 
Protein sequence
MKHPTRMASA VALGASIALL AAACSGGSDE GSTGEASEGA DVTLTWWHNS NNEPGRGFYE 
QAAADYEADH PGVTIEIQAL QHEDMLTKLD AAFQTGDTPD VYMERGGGEL ADHVEAELTM
DLTDVAADAV ETVGGSVAGW QVDGRTYALP FSVGVVGFWY NTELFEQAGI TEAPTTMDEF
DDAVSALRDA GIAPVSVGAG DLWPAAHFWY YFAVRQCAQD VLSEAVTSLD FSDECFLRAG
EDLEHLIGTE PFNEGFLATP AQSGPTSASA LLATGQVAME LAGHWEPGVM QGLTEDQLGL
GENTGWFPFP QVDGGEGDPA ATLGGGDAWA CSADAPPECV DFISYLLSDD VQIGFAENSM
GLPTNQAASG SVADPALADL LTVRDSAPYV QLYLDTAFGE NVGGAMNDAI GLMFAGDASP
QDIVDAIQSA AGTA