| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7590 |
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| Symbol | |
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| ID | 7380248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 535272 |
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| End bp | 536615 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641600 |
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| Product | ABC transporter substrate binding protein (sugar) |
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| Protein accession | YP_002539897 |
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| Protein GI | 222102858 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACGGA CCTGCCCGGC GGCCACCGGG CAGGTCCGAA AGTCAAGACC ACTCCACCTT
GTAGGAAACA CCATGAAAAT GAAAAACATC TTCGCGGTTG CAGCCCTGAC CGTGTTCGGG
ACTGCACCGG CTTTCGCCGC TGATCCAGTC ACGCTGACCT TTTATCACAC ACGACTTGCC
TTTATGCAGC CTATTCTGGA GGGTTTCAAG AAGGCACATC CAGAGATCAC CATCAACGAG
CAGGCACCAG CCGAAAACTA CAGCGCCGGT GACCAAAGCG TCATTCGTGG AATGATGACG
GGCTCGACGC CGGATGTCTA TCTCGCCTCC TACTCCTCCA TTCCTACCCT TGTCGGCGTG
ATGAAGGATC GGGGCGAGAC AAGTTCGCTC GATCCGATGT TGGATAAGGA AGGGAAGGAC
TGGCAGGCGG CCAATTATGC CCCCGCCATT CTTGACCTCG CAAAAGTCGA TGGTCAACAG
TATGCGATGC CATTTACGGC ATCCCTGCCG CTTCTCTACG TCAATAAGGA TTTGGTCGAA
AAGGCCGGTG GCAATGTCGA TCAGTTCCCA ACCACATGGG ATGGCGTCAT TGATCTGGCA
GCCAAGATCA GCAAGCTCGG CAATGGCGTC TCGGGCATCG GTTTCTCGGT CGGTGGGCTG
AGCGATGACT GGTACTGGCA GATGATGGTG ATGAGCGCTG GTGACCAGAT GCTCGACGCC
AAAGCCACGG GTATCGGTTA TGACAATAAG GCTGGGCTGG AAGCATTGCG CATCACCCAG
GACCTGGCGG TCAAGACGGG CATGTCGGTT TATGCCGACC CCAAGCCTGC ACAGCAGCAG
TTCTTTGCCG GGAAGATCGG CATGGTGGTT GAATCGCCAT CCGATCTCGT GGCTTACGAG
ACGGCCATCG GCGACCGCTT CACCATGCGC ACCGTCCGCT TCCCGCTGAT CGATGCCAAG
AAGGGCGGCC TGCCTGCTGG TGGAAATGCC CTGATGGTGT TTTCCAAGGA TGCGGCCAAG
CGCGCAGCAG CCTGGGAGTT CGTCAAATAC ATGACCAGCG CTTCCGTTCA GGCCGACGTC
TCAAAGGCAA GTGGCTACAT GCCGGTCAAC GTTCAGGCCG CCAAGGCGCT CGAGAGCTTT
TATGCAGAGC ATCCGAACTT CCAAACGGTC TTCAAGTCGA TGAATACGGC CATGCCATGG
TTTGCCTATC CGAACAACAC AGCGGATGGC GTCTGGAAGG GCGTGGCACC AATCCTGGAC
CAATTGCAGC GAGGCAAAAT CACGCCTGAG GCTGCCATGC CAAAAATCCG CGAGCATGTC
GCGGGTGTGA TGGCGGCAAA GTAA
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| Protein sequence | MIRTCPAATG QVRKSRPLHL VGNTMKMKNI FAVAALTVFG TAPAFAADPV TLTFYHTRLA
FMQPILEGFK KAHPEITINE QAPAENYSAG DQSVIRGMMT GSTPDVYLAS YSSIPTLVGV
MKDRGETSSL DPMLDKEGKD WQAANYAPAI LDLAKVDGQQ YAMPFTASLP LLYVNKDLVE
KAGGNVDQFP TTWDGVIDLA AKISKLGNGV SGIGFSVGGL SDDWYWQMMV MSAGDQMLDA
KATGIGYDNK AGLEALRITQ DLAVKTGMSV YADPKPAQQQ FFAGKIGMVV ESPSDLVAYE
TAIGDRFTMR TVRFPLIDAK KGGLPAGGNA LMVFSKDAAK RAAAWEFVKY MTSASVQADV
SKASGYMPVN VQAAKALESF YAEHPNFQTV FKSMNTAMPW FAYPNNTADG VWKGVAPILD
QLQRGKITPE AAMPKIREHV AGVMAAK
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