More than 300 homologs were found in PanDaTox collection
for query gene Dgeo_2919 on replicon NC_009939
Organism: Deinococcus geothermalis DSM 11300



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  100 
 
 
407 aa  830    Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  68.64 
 
 
410 aa  568  1e-161  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  68.64 
 
 
410 aa  568  1e-161  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  42.82 
 
 
423 aa  335  7e-91  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  29.98 
 
 
461 aa  184  2.0000000000000003e-45  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_011884  Cyan7425_3276  extracellular solute-binding protein family 1  28.68 
 
 
420 aa  177  3e-43  Cyanothece sp. PCC 7425  Bacteria  normal  0.147153  normal  0.336546 
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  31.69 
 
 
466 aa  172  6.999999999999999e-42  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  30.67 
 
 
444 aa  170  4e-41  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  28.68 
 
 
437 aa  166  5e-40  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  29.72 
 
 
415 aa  164  3e-39  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0420  ABC sugar transporter, periplasmic ligand binding protein  31.94 
 
 
410 aa  161  2e-38  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  28.97 
 
 
436 aa  159  7e-38  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  27.75 
 
 
414 aa  156  8e-37  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4057  extracellular solute-binding protein  31.67 
 
 
410 aa  155  2e-36  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3538  Maltose-binding periplasmic protein/domains- like protein  30.15 
 
 
406 aa  154  2.9999999999999998e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.385239  normal 
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  26.83 
 
 
445 aa  154  2.9999999999999998e-36  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  25.58 
 
 
437 aa  152  8e-36  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_010320  Teth514_0753  extracellular solute-binding protein  27.89 
 
 
429 aa  152  1e-35  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00037903  n/a   
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  29.57 
 
 
431 aa  149  7e-35  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  28.43 
 
 
441 aa  149  8e-35  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_2834  extracellular solute-binding protein  29.48 
 
 
459 aa  149  1.0000000000000001e-34  Frankia sp. CcI3  Bacteria  normal  0.873121  normal 
 
 
-
 
NC_008010  Dgeo_2726  extracellular solute-binding protein  29.78 
 
 
437 aa  148  2.0000000000000003e-34  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.290956  n/a   
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  28.97 
 
 
415 aa  147  3e-34  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  26.11 
 
 
437 aa  147  3e-34  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  25.58 
 
 
436 aa  146  7.0000000000000006e-34  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_010676  Bphyt_7208  extracellular solute-binding protein family 1  31.7 
 
 
410 aa  145  8.000000000000001e-34  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  26.95 
 
 
432 aa  145  2e-33  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  28.34 
 
 
431 aa  144  2e-33  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3988  extracellular solute-binding protein family 1  26.08 
 
 
422 aa  144  3e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1099  extracellular solute-binding protein  29.19 
 
 
457 aa  144  4e-33  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.98 
 
 
458 aa  143  5e-33  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  27.36 
 
 
410 aa  143  5e-33  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  28.76 
 
 
411 aa  142  9.999999999999999e-33  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_009921  Franean1_3944  extracellular solute-binding protein  27.55 
 
 
464 aa  141  1.9999999999999998e-32  Frankia sp. EAN1pec  Bacteria  normal  0.920276  normal  0.0416082 
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  28.61 
 
 
410 aa  141  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  26.83 
 
 
439 aa  141  3e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  28.61 
 
 
410 aa  140  3e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.74 
 
 
458 aa  140  3.9999999999999997e-32  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.25 
 
 
458 aa  139  7.999999999999999e-32  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  27.49 
 
 
458 aa  139  1e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.49 
 
 
458 aa  139  1e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.49 
 
 
458 aa  139  1e-31  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  29.44 
 
 
422 aa  139  1e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  27.49 
 
 
458 aa  138  2e-31  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.25 
 
 
458 aa  137  2e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  27.49 
 
 
458 aa  138  2e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2611  extracellular solute-binding protein family 1  28.8 
 
 
453 aa  138  2e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.058641  normal 
 
 
-
 
NC_013595  Sros_3339  Maltose-binding periplasmic protein/domains- like protein  28.54 
 
 
431 aa  137  3.0000000000000003e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.202326 
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  27.36 
 
 
462 aa  136  6.0000000000000005e-31  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  30.54 
 
 
504 aa  136  6.0000000000000005e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011981  Avi_7590  ABC transporter substrate binding protein (sugar)  29.97 
 
 
447 aa  136  7.000000000000001e-31  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  25.91 
 
 
448 aa  134  1.9999999999999998e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1296  extracellular solute-binding protein family 1  26.88 
 
 
443 aa  134  1.9999999999999998e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.190784  normal 
 
 
-
 
NC_013947  Snas_3121  extracellular solute-binding protein family 1  29.18 
 
 
445 aa  134  3e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00116931 
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  26.59 
 
 
444 aa  134  3.9999999999999996e-30  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  27.37 
 
 
424 aa  134  3.9999999999999996e-30  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_013205  Aaci_2049  extracellular solute-binding protein family 1  28.5 
 
 
438 aa  134  3.9999999999999996e-30  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.266449  n/a   
 
 
-
 
NC_010003  Pmob_1492  extracellular solute-binding protein  27.65 
 
 
421 aa  134  3.9999999999999996e-30  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  26.76 
 
 
458 aa  133  6e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5398  ABC transporter substrate binding protein (sugar)  27.06 
 
 
403 aa  132  1.0000000000000001e-29  Agrobacterium vitis S4  Bacteria  normal  0.14652  n/a   
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  25 
 
 
444 aa  131  2.0000000000000002e-29  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_009667  Oant_2485  extracellular solute-binding protein  28 
 
 
415 aa  131  2.0000000000000002e-29  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00421769  n/a   
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  29.5 
 
 
420 aa  130  3e-29  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_011366  Rleg2_5687  extracellular solute-binding protein family 1  27.18 
 
 
401 aa  130  5.0000000000000004e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.627079  normal 
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  24.58 
 
 
441 aa  129  7.000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2683  extracellular solute-binding protein family 1  25.38 
 
 
446 aa  129  7.000000000000001e-29  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.50155  normal 
 
 
-
 
NC_009953  Sare_0747  extracellular solute-binding protein  27.96 
 
 
433 aa  129  7.000000000000001e-29  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00190936 
 
 
-
 
NC_010717  PXO_00880  ABC transporter sugar binding protein  27.2 
 
 
440 aa  128  2.0000000000000002e-28  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.106592  n/a   
 
 
-
 
NC_012858  Rleg_6631  extracellular solute-binding protein family 1  27.27 
 
 
410 aa  126  5e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.325237 
 
 
-
 
NC_013131  Caci_2108  extracellular solute-binding protein family 1  28.97 
 
 
430 aa  126  8.000000000000001e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.553068 
 
 
-
 
NC_008541  Arth_3465  extracellular solute-binding protein  29.83 
 
 
411 aa  126  8.000000000000001e-28  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3042  extracellular solute-binding protein  27.94 
 
 
406 aa  126  9e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0658677  normal 
 
 
-
 
NC_013093  Amir_0348  extracellular solute-binding protein family 1  28.64 
 
 
419 aa  125  1e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2582  extracellular solute-binding protein family 1  27.94 
 
 
416 aa  125  1e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_4930  extracellular solute-binding protein family 1  28.93 
 
 
419 aa  124  2e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.265943  normal 
 
 
-
 
NC_013947  Snas_0203  extracellular solute-binding protein family 1  27.61 
 
 
441 aa  124  2e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.346278  normal  0.123927 
 
 
-
 
NC_013235  Namu_0514  extracellular solute-binding protein family 1  28.79 
 
 
426 aa  124  2e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013202  Hmuk_0944  extracellular solute-binding protein family 1  26.01 
 
 
433 aa  125  2e-27  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.322748 
 
 
-
 
NC_009620  Smed_4644  extracellular solute-binding protein  26.8 
 
 
409 aa  124  3e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.0265502  normal  0.0904039 
 
 
-
 
NC_009523  RoseRS_3149  extracellular solute-binding protein  25.38 
 
 
427 aa  124  4e-27  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_6240  ABC transporter substrate binding protein (maltose)  27.06 
 
 
407 aa  123  5e-27  Agrobacterium vitis S4  Bacteria  normal  0.0994607  n/a   
 
 
-
 
NC_010513  Xfasm12_1607  ABC transporter sugar-binding protein  25.9 
 
 
430 aa  122  9.999999999999999e-27  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1550  extracellular solute-binding protein  25.9 
 
 
430 aa  122  9.999999999999999e-27  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0803  extracellular solute-binding protein  28.14 
 
 
433 aa  122  9.999999999999999e-27  Salinispora tropica CNB-440  Bacteria  normal  0.437157  normal 
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  24.94 
 
 
437 aa  122  9.999999999999999e-27  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4083  extracellular solute-binding protein family 1  30.17 
 
 
417 aa  121  1.9999999999999998e-26  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008783  BARBAKC583_0349  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  24.34 
 
 
441 aa  121  1.9999999999999998e-26  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  25.69 
 
 
444 aa  121  3e-26  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1886  extracellular solute-binding protein family 1  26.42 
 
 
435 aa  121  3e-26  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.23125 
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  25 
 
 
452 aa  120  3e-26  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  25 
 
 
399 aa  120  3e-26  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  24.3 
 
 
424 aa  120  3.9999999999999996e-26  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_009664  Krad_0385  extracellular solute-binding protein family 1  28.61 
 
 
410 aa  120  3.9999999999999996e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0390662 
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  25.3 
 
 
431 aa  118  9.999999999999999e-26  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_009486  Tpet_0954  extracellular solute-binding protein  26.54 
 
 
411 aa  118  1.9999999999999998e-25  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0970  extracellular solute-binding protein  26.54 
 
 
411 aa  118  1.9999999999999998e-25  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.000309876  n/a   
 
 
-
 
NC_014212  Mesil_0475  extracellular solute-binding protein family 1  28.47 
 
 
397 aa  117  3.9999999999999997e-25  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0648  extracellular solute-binding protein family 1  25.43 
 
 
447 aa  117  3.9999999999999997e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  25.12 
 
 
431 aa  117  3.9999999999999997e-25  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_23010  extracellular solute-binding protein family 1  25.32 
 
 
436 aa  117  5e-25  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000978171  n/a   
 
 
-
 
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