Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3149 |
Symbol | |
ID | 5210119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3962182 |
End bp | 3963465 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640596740 |
Product | extracellular solute-binding protein |
Protein accession | YP_001277460 |
Protein GI | 148657255 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTGA CACGCAGATA TGGCTTGTTT GCGCTATTCG TTGTTGTGCT TGTCGCCTGC GCCACGCCGC CGCCAGCGCC AGCAAGAGAA ATCACGTTCA TGGTATCTGG CGATGCTGCC GAAAAAGCGG CATACGAGCG CCTGGTGGCA GCATTTCGAG AACGCCATCC AACGATTCAG GTGACGCTCA TCCACATTCC GGGGCAGAGC GATTATCGGA AGCGACTCGG TATCGATTTT GCTGCGGGCA CACCGGCAGA TATCGTCCTG ATCAACTACC GGCGCTACGC TGCCTTCGCC GCCAGAGGCG TCCTCGAGCC GCTCGGTCCG TACCTGGCGC AGAGTGCAGT TATCAGCGCA GACGACTTTT ATGCCGAAGC AATGACCCCC TTCATCTGGC AGGGCGTGAT CATGTGCCTT CCGCAGAACC TTTCCAGCCT GGTTGTCTAC TACAACCGCG ATCTGTTCCG CGCTGCCGGG CTTCCTGACC CGTCGCCGGA TTGGACGTGG AACGACATGC TGGAGGCGGC GCAGCGGTTG ACGCGCGACG CCAACGGTGA CGGCGTGGTT GATCAGTATG GTCTGGGAAC GGAGGTGTCA CTGTTTCGGC TGGCGCCGTT CATCTGGCAG AATGGCGGCG ATGTCGTCGA TGATCCGCAG ACGCCGACTC GTCTGACGCT CGACACACCG GCGGCGCGCG AGGCGATCCA GTGGTTCGTC GATCTGCAAG TCAAACACCA CGTGACGCCC GACGCGGTGG CAGAGGCAGC CGAGAGCAGC GAAAGCCGAT TTTTGAACGG TCGTCTCGGC ATGTTTCTGA ACAGTCGGCG TGGCGTGCCA ACGTATCGAA CCATCACTGA TTTCGATTGG GACGTCGCCC CGCTGCCACG CGGGAAACAG CGCGCTGGCA TTCTCCACGC CGATGCCTAC TGCATGGCGC AGGTCAGCAA ACAGAAGGAA GCAGCATGGA CTTTTATCGA GTTCGCCAAT TCCGTTGAAG GGCAGCGCAT CATCGCCGCA ACCGGTCGCA CCGTGCCATC GCTGCGTGCG GTCGCCAGTT CGCCGGTCTT TCTCGATCCA CACACCAGAC CGGCGAACAG TCGGGTGTTT CTCGATGGCA TTGCGTTCAT TCGCGCAGTA CCGGTCATGG AAACATGGGT GGACATCGAA GATATAGTGG CGGAAGAATT GAAGCGCGCC TATTATGGAC AGGCAAGCGT TGATGACGTG ATTGAAACGG CAATCACCCG GACGCGCCCG TTTTTTACCC GGCGCGATAG ATAG
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Protein sequence | MTLTRRYGLF ALFVVVLVAC ATPPPAPARE ITFMVSGDAA EKAAYERLVA AFRERHPTIQ VTLIHIPGQS DYRKRLGIDF AAGTPADIVL INYRRYAAFA ARGVLEPLGP YLAQSAVISA DDFYAEAMTP FIWQGVIMCL PQNLSSLVVY YNRDLFRAAG LPDPSPDWTW NDMLEAAQRL TRDANGDGVV DQYGLGTEVS LFRLAPFIWQ NGGDVVDDPQ TPTRLTLDTP AAREAIQWFV DLQVKHHVTP DAVAEAAESS ESRFLNGRLG MFLNSRRGVP TYRTITDFDW DVAPLPRGKQ RAGILHADAY CMAQVSKQKE AAWTFIEFAN SVEGQRIIAA TGRTVPSLRA VASSPVFLDP HTRPANSRVF LDGIAFIRAV PVMETWVDIE DIVAEELKRA YYGQASVDDV IETAITRTRP FFTRRDR
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