Gene Sros_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3339 
Symbol 
ID8666627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3655379 
End bp3656674 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content67% 
IMG OID 
ProductMaltose-binding periplasmic protein/domains- like protein 
Protein accessionYP_003339021 
Protein GI271964825 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.202326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGAG CCTTCTCGGC TGCGACGATC GTCGCGGCAC TCGCCCTGGC GGTCTCCGCC 
TGTGGTGGCG GCGACAGTGG TTCGGCGGCG GCCCCCGCCC AGTCCGCCGC GGCCGACCCG
TCGAAGATCA GCGGTGAGAT CACCTGGTGG GACACCGTCC GGCCGGACAG TGAGGGGCCG
ACGTTCCAGG CGCTCATCAA CGAATTCCAG GCGAAGTACC CCAATATCAA GGTCAAGTAC
GTCAACGTCC CCTCGGACCA GGCGCAGAAC AAGTTCCAGA CCGCGGCGCA GGCCGGCAGC
GGGGCGCCGG ACGTGATCCG CTCCGAGGTC GCCTGGACCC CCCAGTTCGC CTCCCTCGGC
TACCTCCAGC CGCTGGACGG CACGCGCGCC GTGGAGAACG AGTCCGACTT CCTGCCGAGC
CCGCTGAGCA GCACCAAGTA CAACGGCAAG GCCTACGCGG TACCGCAGGT CACCGACACC
CTGGCGCTGC TGTACAACAA GAAGCTGCTC AAGGAGGCCG GCTGGGAGAA GGCGCCCACC
ACGCTCGAGG AGCTGAAGAA GGCCGCGCTC GACGTCAAGG AGAAGGCCGG CGTCAGCGGC
ATCGCGCTCA ACGTCGACGC CTACTTCCTG CTGCCCTTCA TGTACGGCGA GGGCGGTGAC
CTCCTCGACG TCCAGAACAA GAAGATCGCC GTCAACTCCC CGGCCAACGT CAAGGCCATG
GCGGCGGTCG ACGACCTGAT CAAGTCCGGT GCCGCGCCCA AGCCCGCGAT CCAGGACAGC
TACGCCAACG CCATGACCGC CCTGAAGGAC GGCAAGGCCG CGATGATCTA CAACGGCCCC
TGGGCGCTGT CGGAGATCTA CCAGGGCAAG GAGTTCAAGG ACAAGGAGAA CCTCGGCATC
GCCCCCGTCC CCGCGGGGTC GGTCAAAGCA GGCGCTCCCA CCGGCGGCTG GAACTACGCC
ATCTACGCCG GTTCCAAGAA CCTCGACGCC TCCTACGAGT TCGTCCGCTT CATGAGCACC
CCCGAGGCCC AGGCCAAGGT CGCCAAGGAG ATCAGCCTCC TGCCGACCCG CGCCTCCGCC
TACGACAACC CCGACGTCCA GGGCAACAAG GACGTCGCCA CCTTCAAGCC GATCCTCGAC
ACCGCGGTCG CGCGTCCGTG GATCCCCGAG GGCGGCCAGC TCTTCCAGCC CCTCCTTGAG
GGTTACCAGT CCCTGGTCGG CGGAAAGTCC TCGCCCGAGG ACCTGGTCAA GTCGGTGGAC
GAGAAGTACC GCGGCATCTT CAAGGACTGG AGCTGA
 
Protein sequence
MRRAFSAATI VAALALAVSA CGGGDSGSAA APAQSAAADP SKISGEITWW DTVRPDSEGP 
TFQALINEFQ AKYPNIKVKY VNVPSDQAQN KFQTAAQAGS GAPDVIRSEV AWTPQFASLG
YLQPLDGTRA VENESDFLPS PLSSTKYNGK AYAVPQVTDT LALLYNKKLL KEAGWEKAPT
TLEELKKAAL DVKEKAGVSG IALNVDAYFL LPFMYGEGGD LLDVQNKKIA VNSPANVKAM
AAVDDLIKSG AAPKPAIQDS YANAMTALKD GKAAMIYNGP WALSEIYQGK EFKDKENLGI
APVPAGSVKA GAPTGGWNYA IYAGSKNLDA SYEFVRFMST PEAQAKVAKE ISLLPTRASA
YDNPDVQGNK DVATFKPILD TAVARPWIPE GGQLFQPLLE GYQSLVGGKS SPEDLVKSVD
EKYRGIFKDW S