Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_2726 |
Symbol | |
ID | 4073957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008010 |
Strand | + |
Start bp | 301262 |
End bp | 302575 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641228750 |
Product | extracellular solute-binding protein |
Protein accession | YP_594233 |
Protein GI | 94972193 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.290956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCGCT CTCTTTGCCG GACTGCCCTG CTGGCCCTGC TCGCCCTGGG AGGCGCGGGT GCCCAGACCT ACACCGGGCC CAAGGTCACC CTCACCTTCC TGCATGGCTT TACTGGCCCC GACCGGCCCG TGATGGAAGG GCTGATCAAG AAGTTCAACG ACACACACCC CAATATCCAG GTGCGTGCGC AGGCGCAGCC CTGGGGGACC ACCTGGCAGC AATTGCCCTC GCTGGTCGCC TCGGGCCGCG CGCCGGATGT GGTGGTGATC AACGAAGACC AGATCACCGG CTTTATCGCC CGCGGGGCGG TGTCGCCCCT CAGCCCCAGC GAGCTGAAAG CCGCCGGAAT TGACCGGAGC CGCTTTTTCG GCCCGCTGTT CGCCACCGCC GACTACAAGG GTCAGTCGTA CGGCGTGCCG GTATCGAGCG TGGCGTATGT GATGTTCTAC AACAAGGATC TGATGAAAAA GGTCGGCCTG GATCCCAACA AGCCGCCCCG CACCCGCGCC GATTTCCTGG CGGCAGTGCA GAAATGCACG GTGGACAAAA CCGGCAAGAA CGCGACCCAG GCGGGCTTTG ATCCCAAGAA CCTCGACACC TGGGGTGTCA GCCTCTACAA CAACTGGGTG GGCGCGCGCG CGGCCTACGC CGCCATCCTG CAAAACGGCG GAGCGATGGT GGATCAGAAG GAAAATGCGG CCTTCAATTC ACCGCAGGCG ATCAGCGCGG TGCAGTTTCT GGTGGACCTG GTGCAAAAGG ACCATGTCGC GCGACCCAAC AGCACCGAGG AGGCCGAGCT GGCAGCCTTT AGCCAGGGCA AAGTCTGCTT CTTCCCCAGC GGGCAGTGGT ATCTCGACCG CTTCAAGGGA CAGAAGCTGA ATTTCGGCGT GACCTTTCTG CCGCGGATCG GCGGCAACGT GCGCGATGCG GCCTGGGGTG GATCGAGCCA CCTCACCCTG CCCAAGCAGC GCGCCGGCTA CGACGCCAAC AAGCGTCAGG CCGCCCTGGT CTTCATGTCG TGGCTGACGC AGCCCGCGCA GAACCTCACC TGGACCAGCA CCGGCAGCCT GCCGACGCAG CCCGCGGTGG CGAAAAACCC GCAGTTTGCC AACAACCCGA TCAGCGGCGT CTTCGACCGC CTGAGCAGCG TCTACGCGAC CAGCGGCTAC CCCTGGGTCG GGCAGGTGAT GTCGCCCTTT GATCAGGCTT GGGAAGCCGC CTACTTGGGC AAAAAGACCG TCGCGCAGGC ACTGAATGAC GGTGTACGCG AGGCGAACAA GCAGATCGAG CAGGCCCGCA AGAACTTCCA GTAA
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Protein sequence | MPRSLCRTAL LALLALGGAG AQTYTGPKVT LTFLHGFTGP DRPVMEGLIK KFNDTHPNIQ VRAQAQPWGT TWQQLPSLVA SGRAPDVVVI NEDQITGFIA RGAVSPLSPS ELKAAGIDRS RFFGPLFATA DYKGQSYGVP VSSVAYVMFY NKDLMKKVGL DPNKPPRTRA DFLAAVQKCT VDKTGKNATQ AGFDPKNLDT WGVSLYNNWV GARAAYAAIL QNGGAMVDQK ENAAFNSPQA ISAVQFLVDL VQKDHVARPN STEEAELAAF SQGKVCFFPS GQWYLDRFKG QKLNFGVTFL PRIGGNVRDA AWGGSSHLTL PKQRAGYDAN KRQAALVFMS WLTQPAQNLT WTSTGSLPTQ PAVAKNPQFA NNPISGVFDR LSSVYATSGY PWVGQVMSPF DQAWEAAYLG KKTVAQALND GVREANKQIE QARKNFQ
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