Gene Pmob_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0954 
Symbol 
ID5756924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1013687 
End bp1014886 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content40% 
IMG OID641302162 
Productextracellular solute-binding protein 
Protein accessionYP_001567999 
Protein GI160902418 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0450213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGA CTTTGGTTGT TTTGAGTGTT GTGATGATGT TGGTTTCCTT GAATTTTGGT 
GCAACAAAGA TAACAGTGTG GGGTATGGGT CAGGGAAAAA GTTTGGAGCA ATTGTCAAAA
CTTTTTATGG AAGAATACCC CGAATATGAG GTAGATTTCC AAGCCATACC TTGGTCAAAT
GCCTACGAAA AAATTTTAAC ATCAATCGCT GGCAGACAAG TCCCGGATGT TGCACAGATG
GGAACAACTT GGATGGCTCC GTTTGGAAGC ATGGGGGCAT TTGAAGATTT AGCTCCATAT
ATTGAAAGTT CAGAAGTTGT AAAACCAGAG AATTTTTTCG AGGGAGCATG GGAAACAGGA
ATAGTTGATG GAAAGCAGTT TGGTATTCCT TGGCATGTGG ATGTTAGAGC TATGTTCTAT
AGAACAGATT TATTAGCACA AGTAGGTTAC GATCATGCTC CTCAAACCTG GGATGAGTTG
TACGATGCGG TAAAAAAACT ACATGAAAAC GGCAGTAGAT ATGGCATAGC GCTTTACCAA
CCTCAGGATA ATTACCAAAC TTTTTTCCCC TTTGTTTGGC AAAATGGAGG AGATATATTA
GACAGCCAAG GAAATGTGAC AGTGGATCAA CATGAATTCG TTGAGGCTCT TGAGTATTAT
ACGAGATTTT TCACAGAAGG GTTGACCCCT ATTTCGGGAA GCGGTAACAT ATTCCAAGAT
TTTGCTTCAG GAGATACCCC AATTTATTTT TCAGGTCCAT GGATGATTAA TATGACTAGA
GATCAAACAC CCCAAATAGA TGGTAAGTGG GATGTTGCGT TAATGCCTGA GAAAAAAAGT
AGAACATCCT TTATGGGAGG TAGTGATTTA GTAATTTTCA GGGATTCCAA AAACAAAGAA
GGTGCTTGGA AGTTCATAGA GTTTGCATCG AGACCTGAAA ACCAACTGTT GGCCTATCAA
ATTACAAATG AACTACCTGC AGCCAGACAA GCATGGGAAG ATCCTTTATT ACAAGCAGAT
CCCATGATAG CAACGTTCGG TGAACAGTTG AATGATGCTA AAGCTCCTGT AAACGTTCCC
GAATTTCATG AGATTGCAGC TGCAATTGAT AGGATGGTTC AAGAAGTGAT TTATGGCAGA
AAAACACCGG AACAAGCAGC TCAGGATTTG AAAAAAGAAA TTGAAAAGAT ACTGAAATAA
 
Protein sequence
MRKTLVVLSV VMMLVSLNFG ATKITVWGMG QGKSLEQLSK LFMEEYPEYE VDFQAIPWSN 
AYEKILTSIA GRQVPDVAQM GTTWMAPFGS MGAFEDLAPY IESSEVVKPE NFFEGAWETG
IVDGKQFGIP WHVDVRAMFY RTDLLAQVGY DHAPQTWDEL YDAVKKLHEN GSRYGIALYQ
PQDNYQTFFP FVWQNGGDIL DSQGNVTVDQ HEFVEALEYY TRFFTEGLTP ISGSGNIFQD
FASGDTPIYF SGPWMINMTR DQTPQIDGKW DVALMPEKKS RTSFMGGSDL VIFRDSKNKE
GAWKFIEFAS RPENQLLAYQ ITNELPAARQ AWEDPLLQAD PMIATFGEQL NDAKAPVNVP
EFHEIAAAID RMVQEVIYGR KTPEQAAQDL KKEIEKILK