Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_0954 |
Symbol | |
ID | 5756924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | + |
Start bp | 1013687 |
End bp | 1014886 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641302162 |
Product | extracellular solute-binding protein |
Protein accession | YP_001567999 |
Protein GI | 160902418 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0450213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAGA CTTTGGTTGT TTTGAGTGTT GTGATGATGT TGGTTTCCTT GAATTTTGGT GCAACAAAGA TAACAGTGTG GGGTATGGGT CAGGGAAAAA GTTTGGAGCA ATTGTCAAAA CTTTTTATGG AAGAATACCC CGAATATGAG GTAGATTTCC AAGCCATACC TTGGTCAAAT GCCTACGAAA AAATTTTAAC ATCAATCGCT GGCAGACAAG TCCCGGATGT TGCACAGATG GGAACAACTT GGATGGCTCC GTTTGGAAGC ATGGGGGCAT TTGAAGATTT AGCTCCATAT ATTGAAAGTT CAGAAGTTGT AAAACCAGAG AATTTTTTCG AGGGAGCATG GGAAACAGGA ATAGTTGATG GAAAGCAGTT TGGTATTCCT TGGCATGTGG ATGTTAGAGC TATGTTCTAT AGAACAGATT TATTAGCACA AGTAGGTTAC GATCATGCTC CTCAAACCTG GGATGAGTTG TACGATGCGG TAAAAAAACT ACATGAAAAC GGCAGTAGAT ATGGCATAGC GCTTTACCAA CCTCAGGATA ATTACCAAAC TTTTTTCCCC TTTGTTTGGC AAAATGGAGG AGATATATTA GACAGCCAAG GAAATGTGAC AGTGGATCAA CATGAATTCG TTGAGGCTCT TGAGTATTAT ACGAGATTTT TCACAGAAGG GTTGACCCCT ATTTCGGGAA GCGGTAACAT ATTCCAAGAT TTTGCTTCAG GAGATACCCC AATTTATTTT TCAGGTCCAT GGATGATTAA TATGACTAGA GATCAAACAC CCCAAATAGA TGGTAAGTGG GATGTTGCGT TAATGCCTGA GAAAAAAAGT AGAACATCCT TTATGGGAGG TAGTGATTTA GTAATTTTCA GGGATTCCAA AAACAAAGAA GGTGCTTGGA AGTTCATAGA GTTTGCATCG AGACCTGAAA ACCAACTGTT GGCCTATCAA ATTACAAATG AACTACCTGC AGCCAGACAA GCATGGGAAG ATCCTTTATT ACAAGCAGAT CCCATGATAG CAACGTTCGG TGAACAGTTG AATGATGCTA AAGCTCCTGT AAACGTTCCC GAATTTCATG AGATTGCAGC TGCAATTGAT AGGATGGTTC AAGAAGTGAT TTATGGCAGA AAAACACCGG AACAAGCAGC TCAGGATTTG AAAAAAGAAA TTGAAAAGAT ACTGAAATAA
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Protein sequence | MRKTLVVLSV VMMLVSLNFG ATKITVWGMG QGKSLEQLSK LFMEEYPEYE VDFQAIPWSN AYEKILTSIA GRQVPDVAQM GTTWMAPFGS MGAFEDLAPY IESSEVVKPE NFFEGAWETG IVDGKQFGIP WHVDVRAMFY RTDLLAQVGY DHAPQTWDEL YDAVKKLHEN GSRYGIALYQ PQDNYQTFFP FVWQNGGDIL DSQGNVTVDQ HEFVEALEYY TRFFTEGLTP ISGSGNIFQD FASGDTPIYF SGPWMINMTR DQTPQIDGKW DVALMPEKKS RTSFMGGSDL VIFRDSKNKE GAWKFIEFAS RPENQLLAYQ ITNELPAARQ AWEDPLLQAD PMIATFGEQL NDAKAPVNVP EFHEIAAAID RMVQEVIYGR KTPEQAAQDL KKEIEKILK
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