| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3988 |
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| Symbol | |
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| ID | 7858051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 4412118 |
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| End bp | 4413386 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643868091 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002883991 |
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| Protein GI | 229822465 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACGC GCGTTAGTCG AAGGACGGTC CTCGGTGCGC TCGCCGCCGG GGGAGCCGGC
GCCGGTCTCC TCGCCGCGTG CGGGGCGCCC AACCAGCCGC AGTTCGCGGC CTCCGGAGCG
CGCATCCTCA CCATGTGGGG CGGCTGGGCC GGCGATCAGG CGGGGCAGAT CCAGACGCAG
CTCGACGCGT TCAACGCCTC GCAGGGCGAC TACGAGTTCC GGTACGTCCC GCAGGGCGCG
ATGGAGCAGA AGCTCCTCAC GGGCATCGCT GGCGGGAACA TCCCCGACCT CGTGCTCTGG
GACCGTTGGC AGACGGCGAA GTACGCCCGG CGGGGTGCGC TGCAGTCGAT CGACGCGTGG
GCGGAGCGCG ACGGGTTCGA CCTCAACGCG TTCTTCCCGG AGTCGATGCG CGAGATGCAG
GTCGAGGGCG AGACGTTCGG CCTGCCGCTG CTCGTGGACG CTCGCTCGAT CTTCTACAAC
CGCGCGCACC TCGACGAGGC GGGCATCGCG CCACCGACCA CGTGGGACGA GCTGGCCGAC
GCCGCTGAGG CGCTGACGAC CCGGGAGGGC GGCGCGCTGA AGCGGGCCGG GTTCGAGATC
CAGGACGTCG GGCTGTTCAG CATGTACATG TACCAGGCGG GCGGCGAGAT GCTGGACGCC
TCGTTCACGC GCACGGCGTT CGACGCGCCG GAGGGGCTGG ACGTCCTGAG CTTCTGGGAC
GAGCTGCTCC ACGAGCGTCA GGTGTACGAG CTCGGGTTCT CCGACGGGAT CGACGCCTTC
GCGCAGGGGA TCGTCTCGAT CAAGTACGAC GGGCCGTGGC AGCTCCCCAC CTGGGACGCT
GTCGAGGGTC TCGAGTACGG GATCGTGCCG GCCGTGGCCG GGCCTCGCGG CGACCAGGGC
GCCGGTCTCG GCGGCTTCGG GCTCATCATC CCGACCGGCG CGCCGGACCC CGAGGGTGCG
TGGGAGCTCA TGAAGTGGTG GGCGGGGGAG TCGGCGAACA ACGTGGCGTT CAGCGAGATC
AGCGGCTGGA TCCCGGCCAA CGTCGAGGCC GCGAACGATC CCTACTTCGT GGCCGACGAA
CGCTTCGCGC CGCTCGTGGA GACCATCTCC GTGGCACGGA TCCGCCCACC CGTGCCCGGC
TACTCCGACG TCGAGGGTCT CGCGCTCATC CCCGCCCTGC AGCAGGTGAT GTCCGGGACC
CTCTCGGGCG AGGCGGCGCT CGCGCAGGCG CGAGAGCAAG GCGACCGGAT CCTGGAGGCC
AATCGATGA
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| Protein sequence | MSTRVSRRTV LGALAAGGAG AGLLAACGAP NQPQFAASGA RILTMWGGWA GDQAGQIQTQ
LDAFNASQGD YEFRYVPQGA MEQKLLTGIA GGNIPDLVLW DRWQTAKYAR RGALQSIDAW
AERDGFDLNA FFPESMREMQ VEGETFGLPL LVDARSIFYN RAHLDEAGIA PPTTWDELAD
AAEALTTREG GALKRAGFEI QDVGLFSMYM YQAGGEMLDA SFTRTAFDAP EGLDVLSFWD
ELLHERQVYE LGFSDGIDAF AQGIVSIKYD GPWQLPTWDA VEGLEYGIVP AVAGPRGDQG
AGLGGFGLII PTGAPDPEGA WELMKWWAGE SANNVAFSEI SGWIPANVEA ANDPYFVADE
RFAPLVETIS VARIRPPVPG YSDVEGLALI PALQQVMSGT LSGEAALAQA REQGDRILEA
NR
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