Gene Tbis_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1886 
Symbol 
ID9168380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp2180390 
End bp2181697 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content70% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003652491 
Protein GI296269859 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.23125 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGAG TCATCTCCGC CGCGGCGATC GCCGCGGCCC TCGCACTGGC GGCCACCGCC 
TGCGGCGGCA CCGCCGGTAC CGATCCGGCC ACTGCACCGA GCAAGGCGCC CGGTGAGGTC
TCGGGCGAGA TCACCTGGTG GGACACCTCC GACGCCACCA CGGAGGCCCC GGTCTTCCAG
GAGCTGGTCA AGGAGTTCGA GGCGAAGTAC CCGAAGATCA AGGTCAACTA CGTCAACGTG
CCCTTCGCCG ACGCGCGGGA CAAGTTCAAG ACCGCCGCGC AGTCCGGCGC CGGCGCGCCC
GACGTGCTGC GCACGGACGT CGGCTGGGTG GCGGAGTTCG CCTCGCTCGG CTACCTCGCC
CCGCTCGACG GCACCCCCGC CATCGCCGAT CCGCAGGACT TCCTGCCGAC CCCGGCGGCG
AGCGGCCGGT ACAACGGCAA GACCTACGCC GTCCCCCAGG TCACCGACAC GCTCGGCCTG
CTCTACAACA AGGAGCTGCT CAAGAAGGCG GGCCACGACG CGCCCCCGGC CACCATGGCC
GAGCTGAAGC AGGTCGCGCT CGACGTCAAG GAGAAGACCG GGGCCGACGG CCTCGCGCTC
AACATCGACT CCTACTTCCT CCTGCCGTTC ATCTACGGCG AGGGCGGCGA CCTCGTCGAC
GCGGCCGGCA AGAAGATCAC CATCGCCGCG CCGCAGGCCG TCCAGGGCGT CAAGATCGTG
GAGGATCTGA TCAAGTCGGG CGCGGCCGCG AAGCCCGTGC TCCAGGACAG CTACACCACG
GTCGCCACGG CCTTCAAGGA GGGCAAGGTC GCGATGATCT TCAACGGGCC GTGGTCGAAC
GCCGACAACC TCAGCGGCAA GGTGTTCAAG GACAACCCGG ACAACCTCGG CATCGCCCCG
GTCCCGTCCG GCTCGGTCCG CTCCGGCGCC CCCGTGGGCG GCCACGACTA CGCCGTGTAC
GCGGGCTCGA AGAACCTCGA CGCCGCCTAC CTGTTCATCC GGTTCATGGC GAGCAAGGAG
AGCCAGGCGA AGATCGCCGG CAGGCTCGGC CTGCTCCCCA CCCGCGCCTC CGCGTACGAC
CTGCCGGAGG CGAAGGCCAA CCCGCAGGTC GTCCAGTGGC AGAAGCCGAT CGAGTCGGCG
GTCGAGCGCC CGTGGATCCC CGAGGCGGCC TCGCTCTTCC AGCCGCTCCT CGAGGGGTAC
CAGAAGCTCG CCGGCGGCCA GGCGACCGCC GAGCAGATGC TCGAGGAGGT CGCCGCGGAG
TACCAGGGGA TCCTCAAGGG GCTGGAGCCG GTGAGGGATG ACGGCTGA
 
Protein sequence
MRRVISAAAI AAALALAATA CGGTAGTDPA TAPSKAPGEV SGEITWWDTS DATTEAPVFQ 
ELVKEFEAKY PKIKVNYVNV PFADARDKFK TAAQSGAGAP DVLRTDVGWV AEFASLGYLA
PLDGTPAIAD PQDFLPTPAA SGRYNGKTYA VPQVTDTLGL LYNKELLKKA GHDAPPATMA
ELKQVALDVK EKTGADGLAL NIDSYFLLPF IYGEGGDLVD AAGKKITIAA PQAVQGVKIV
EDLIKSGAAA KPVLQDSYTT VATAFKEGKV AMIFNGPWSN ADNLSGKVFK DNPDNLGIAP
VPSGSVRSGA PVGGHDYAVY AGSKNLDAAY LFIRFMASKE SQAKIAGRLG LLPTRASAYD
LPEAKANPQV VQWQKPIESA VERPWIPEAA SLFQPLLEGY QKLAGGQATA EQMLEEVAAE
YQGILKGLEP VRDDG