| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1420 |
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| Symbol | |
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| ID | 4597327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 1504169 |
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| End bp | 1505443 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639776018 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_922621 |
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| Protein GI | 119715656 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.979516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGTT TCCCGTTTGG TCGCCGTGGG GGGCGGACGC GCCTGATCGC GGCGGCTGCG
CTGGCGGTCG CCAGCGTGGC CACCGTCGCA GGATGCGGCG CCGGCTCCGG AGCCAGTGCC
GGTGACGAGG TCAAGCTGCG CTTCCTGTTC CCGGAGTACA GCGCGAAGAC CGCCCCGCTG
ATGCAGGCGA TGGTCGACGA CTTCAACCAG GCCAACGACG GCAAGATCGA GGTGAGCCTC
GAGATCGCCC CCTGGGACAA GATGCACGAC AAGCTCGCGG TCTCCATGGG TTCGGGGCAG
GCGCCCGACG TGTTCGGCTA TGCCACCCGC TGGATCTCCG AGTTCGCGGG CCTCGACCAG
CTCGCACCCC TCGACGAGCA CCTCAGCGAG GACTTCAAGA GCACGTTCAA CCAGAAGGTG
CTCGAGGCCG GCACGTACGA CGGGAAGACC TACGGCCTTC CGGCCGCCGT CTCGGCGCGG
CTGCTGTTCT ACCGCGCGGA CGTGTTCGAG GAGGCCGGCC TGCAGGCGCC CCAGACCTGG
GACGACCTGA TGGAGGCCGC GACGACCACC GGGCAGCCGC CGGAGCGCTA CGGCCTCGGC
GTACCCGCCA GCGGGATCGA GGTCGACACG TTCTTCAACT ACTTCTTGTA CAACAACGGG
GGGGACATCC TCGACGAGAA CGGCAAGTCG ATGCTCAGTG CCCCGGAGAG CGTCGAGGCC
CTGCAGTACC TCACCGACCT GGTCAAGGCC GGGGGCAGTG AGCCGAAGCC CACCGGCTTC
ACCCGCGAGC AGGTCATCGA GAACTTCAAG GCCGGCCAGC TGTCCATGTA TCCCACCGGT
CCGTGGCTCA ACGCCATGAT CGAGGCCGAC AACCCGGACC TCGAGTACTC CGCGGTGCCG
TTCCCGACCA ACGACGGCAA GCCACAGCAG ACCGTCTCCG TGACCGACTC GCTCGGTCTG
TCGGCGAACA CCGAGCACCC CGACGAGGCG TGGAAGTTCG TCGAGTTCAT GTACCAGACG
AAGTACCGCC AGGCCTTCGA CGAGGGCGAG GGCATGCTCC CGGAGCTGAT CGCCGTGAGC
CAGTCGGACT ACTTCCAGAG CCCCGAGTAC AAGCCGTTCG TCGACGCCCT CGACACTGCC
AAGTTCCAGC CGCAGCACCC CAAGTTCGAG CAGATCCAGC AGATCGAGAC CGTCGCCGTG
CAGAAGGCGC TCAGCGGCCA GGCCACGCCC CAGGAGGCGC TGGACGAGGC CACCGAGCAG
ATCGACAAGC TCTGA
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| Protein sequence | MMRFPFGRRG GRTRLIAAAA LAVASVATVA GCGAGSGASA GDEVKLRFLF PEYSAKTAPL
MQAMVDDFNQ ANDGKIEVSL EIAPWDKMHD KLAVSMGSGQ APDVFGYATR WISEFAGLDQ
LAPLDEHLSE DFKSTFNQKV LEAGTYDGKT YGLPAAVSAR LLFYRADVFE EAGLQAPQTW
DDLMEAATTT GQPPERYGLG VPASGIEVDT FFNYFLYNNG GDILDENGKS MLSAPESVEA
LQYLTDLVKA GGSEPKPTGF TREQVIENFK AGQLSMYPTG PWLNAMIEAD NPDLEYSAVP
FPTNDGKPQQ TVSVTDSLGL SANTEHPDEA WKFVEFMYQT KYRQAFDEGE GMLPELIAVS
QSDYFQSPEY KPFVDALDTA KFQPQHPKFE QIQQIETVAV QKALSGQATP QEALDEATEQ
IDKL
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