| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1229 |
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| Symbol | |
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| ID | 3683269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1514019 |
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| End bp | 1515404 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637716567 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_321748 |
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| Protein GI | 75907452 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0257979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.868479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGTTA AAAAATTGAT TAATCTGTTT TATCAAAACT GTGCGCGGTT TTTTTTCGCC
TCTGATGATT CTAGGGTAAA AAGAAAAAAT TGGCGATTTT ACCGATATCG TTGGCTATCG
CTGTTTCTAG TAGGAATATT GGTTACTAGT GGATGTCAGG TAATCCAAAA TGGCATGAAG
GCAGATAAAG TCATTCATTT AACTTTATGG CATGGGGTGA ATCCGCCACC TAATCGGGAT
GTCTTTCAAA AGCTGGTAGA TAAGTTTAAC CAAAGCCATA CAGATATTCA GGTAGATGCG
ATTTACGCTG GACAACAAGA CCAACAAATG CCGAAGATTT TGGCAGCTGT CGTAGGTAAT
GCGTCCCCGG ATATTTTGTG GTACAACCCA GCAACTACAG GGCAACTAGT AGAACTAAAT
GCCTTGGTTC CTTTGGACGA AATGTTGTCA AGTTCACTAA TTAAAGATGA AATTGACCCC
AGCTTATACC CGGCTGTGGA ATACCAGGGT AAAACTTGGG CAGTACCTTT TGCTACAAAT
AATGTTGGCG TTTTTTATCG TCCCAGTTTG TTTAAGGCGG CGGGAATTAC ACAATTACCT
AAGACTTGGG AAGAGTTTCG GGAAGTTGCC AAAAAATTGA CCCGTGATAC CGATGGTGAT
GGAAGAATTG ATCAACATGG GATGGTACTA CCTTTAGGCA AAGGTGAGTT TACCGTTTTT
ACTTGGCTAC CATTTATGTG GAGTGGAGGC GGCGAGTTGG TAAGCAAAGA TTCACAGAAT
GCGGCTGGTG TCACTTTAGA AAATAATGCT GGGGCGATCG CTGCTTTACA ATTGTGGCGT
GATTTAATAA CAGATGGTTC GGCTGTGTTA TCAGGCCCAG AAAGAGGTTA TGAAACCAAC
GATTTGCTAG CTGGTAAAGT AGCGATGCAA TTAACCGGGC CTTGGACTTT AGGGGAGTTT
CAAACTAGTG GGGTTGATTT TGATGTATTC CCTATTCCGG TGGGGCAAAG ACCTGCTACT
GTAATTGGCG GCGAAAATCT TTATATTTTT AAATCTAAAC CGGAAAGAGA AAAGGCAGCT
TTTAAATTTC TTGAATATGC GGCTGGTGAG GAATTTCAAA CAGAGTTAGC ATTGGGAACC
GGTTATTTAC CAATCAATTT AAAATCCCGC GAAAGTGCAA AATATCAGGC ATTTGTGAAA
AAAGTACCCC AAGCAAAGGT ATTTTTAGAA CAGGCTAAAT ATGCGCGATC GCGTCCTACT
TTCCCCGGTT ATAATCGAAT CTCTGATAGT GTGGGTCGGG CAGTGGAAAC TGTATTGATG
GGTAAAAGTT CCCCAGCAGA TGCCCTAAAA GCTAGTCAGC AGCGCTTAGA TTTGATTTTC
AAATAA
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| Protein sequence | MKVKKLINLF YQNCARFFFA SDDSRVKRKN WRFYRYRWLS LFLVGILVTS GCQVIQNGMK
ADKVIHLTLW HGVNPPPNRD VFQKLVDKFN QSHTDIQVDA IYAGQQDQQM PKILAAVVGN
ASPDILWYNP ATTGQLVELN ALVPLDEMLS SSLIKDEIDP SLYPAVEYQG KTWAVPFATN
NVGVFYRPSL FKAAGITQLP KTWEEFREVA KKLTRDTDGD GRIDQHGMVL PLGKGEFTVF
TWLPFMWSGG GELVSKDSQN AAGVTLENNA GAIAALQLWR DLITDGSAVL SGPERGYETN
DLLAGKVAMQ LTGPWTLGEF QTSGVDFDVF PIPVGQRPAT VIGGENLYIF KSKPEREKAA
FKFLEYAAGE EFQTELALGT GYLPINLKSR ESAKYQAFVK KVPQAKVFLE QAKYARSRPT
FPGYNRISDS VGRAVETVLM GKSSPADALK ASQQRLDLIF K
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