Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_6240 |
Symbol | malE |
ID | 7381284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 1233853 |
End bp | 1235076 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643649706 |
Product | ABC transporter substrate binding protein (maltose) |
Protein accession | YP_002547930 |
Protein GI | 222107139 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0994607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA CGTTGACCAT CATGGCGGGC GCGCTGGCGC TGCTGGCAAG CTCGGCTCTG TCGAGTTTTG CGGCGGATAA GGAAATCAGC TGGATCTATT GCGGCGACAA GATCGACCCG ATCCATGAGA AATATATCAA GGTCTGGGAA GGCAAAAACC CGGGCTGGAA GATTGCGCCT GAAGTGGTTG GCTGGGAACA GTGCCAGGAC AAGGCAACCA CTTTGGCTGC CGCCGGGACG CCGGTTGCCA TGGCTTATGT TGGTTCGCGC ACATTGAAGG AGTTCGCCGA GAACGACCTG ATCGTCAAGG TGCCGATGAC GGATGCCGAA AAGAAGAGCT ATTATCCGAA CATCGTCGAT ACCGTAACTT TCGACGATAC CCAGTGGGGC GTGCCGATTG CCTTCTCCAC CAAGGCGCTG TTCTGGAACA AGGATCTGTT CAAGAAGGCC GGTCTTGACC CGGAAACCCC ACCGAAGACC TGGGCTGAGG AAATTGCCTT TGCCAAGCAG ATCAAGGAAA AGACCGGAAT TGCCGGTTAC GGCATGCCTG CCAAGACGTT CGACAACACC ATGCACCAGT TCATGCATTG GGTGTATACC AATAACGGTC AGGTGATGAA CAAGGACGGC AAGATCGTCA TGGACAGCCC GGAAGTGCTG GCAGCGCTTC AGGCCTATAA GGACATTGCT CCCTATTCGG TTGAAGGGGC AACTGCCTAC GAGCAAAACG AAATCCGCGC CATCTTTCTC GACGGCAAGG CAGGGATGAT CCAGAACAGC ACGGGTGCGG CCTATCGCTT GCTGAAGACC GACATCCACT GGGGCGTGAC GACCTTGCCA CTTGGTCCTT CGGCCAAGGG CCCCGGCACG CTGTTGATCA CCGATAGCCT GGCGATCTTC AAGGGCTCCG GTGTCGAGGA CAAGGCAACG GAATTTGCCA AATACATTAC CTCGCCGGAA CCGCAGGAAG AATACGAACT GACGACCGAT TCCGGCCTGA CGCCGCTTCG TCCTTCCGCT AAGGTTGAGC AGTTGATCAA GGATAAGCCT TACTGGAAGC CGTTCATTGA TGGTATCGCC TTCGGTGGTC CTGAGCCTTT GTTCAAGGAT TACAAGGGTT TCCAGAATGT GATGATCGAA ATGGTCCAGT CTGTTGTCAC TGGTAAGGCC GAGCCTGCTG AGGCCTTGAA AAAGGCGTCG GCTGCTATCG ACCAGTACAA GTAA
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Protein sequence | MKNTLTIMAG ALALLASSAL SSFAADKEIS WIYCGDKIDP IHEKYIKVWE GKNPGWKIAP EVVGWEQCQD KATTLAAAGT PVAMAYVGSR TLKEFAENDL IVKVPMTDAE KKSYYPNIVD TVTFDDTQWG VPIAFSTKAL FWNKDLFKKA GLDPETPPKT WAEEIAFAKQ IKEKTGIAGY GMPAKTFDNT MHQFMHWVYT NNGQVMNKDG KIVMDSPEVL AALQAYKDIA PYSVEGATAY EQNEIRAIFL DGKAGMIQNS TGAAYRLLKT DIHWGVTTLP LGPSAKGPGT LLITDSLAIF KGSGVEDKAT EFAKYITSPE PQEEYELTTD SGLTPLRPSA KVEQLIKDKP YWKPFIDGIA FGGPEPLFKD YKGFQNVMIE MVQSVVTGKA EPAEALKKAS AAIDQYK
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