Gene Avi_6240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_6240 
SymbolmalE 
ID7381284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp1233853 
End bp1235076 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content55% 
IMG OID643649706 
ProductABC transporter substrate binding protein (maltose) 
Protein accessionYP_002547930 
Protein GI222107139 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0994607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA CGTTGACCAT CATGGCGGGC GCGCTGGCGC TGCTGGCAAG CTCGGCTCTG 
TCGAGTTTTG CGGCGGATAA GGAAATCAGC TGGATCTATT GCGGCGACAA GATCGACCCG
ATCCATGAGA AATATATCAA GGTCTGGGAA GGCAAAAACC CGGGCTGGAA GATTGCGCCT
GAAGTGGTTG GCTGGGAACA GTGCCAGGAC AAGGCAACCA CTTTGGCTGC CGCCGGGACG
CCGGTTGCCA TGGCTTATGT TGGTTCGCGC ACATTGAAGG AGTTCGCCGA GAACGACCTG
ATCGTCAAGG TGCCGATGAC GGATGCCGAA AAGAAGAGCT ATTATCCGAA CATCGTCGAT
ACCGTAACTT TCGACGATAC CCAGTGGGGC GTGCCGATTG CCTTCTCCAC CAAGGCGCTG
TTCTGGAACA AGGATCTGTT CAAGAAGGCC GGTCTTGACC CGGAAACCCC ACCGAAGACC
TGGGCTGAGG AAATTGCCTT TGCCAAGCAG ATCAAGGAAA AGACCGGAAT TGCCGGTTAC
GGCATGCCTG CCAAGACGTT CGACAACACC ATGCACCAGT TCATGCATTG GGTGTATACC
AATAACGGTC AGGTGATGAA CAAGGACGGC AAGATCGTCA TGGACAGCCC GGAAGTGCTG
GCAGCGCTTC AGGCCTATAA GGACATTGCT CCCTATTCGG TTGAAGGGGC AACTGCCTAC
GAGCAAAACG AAATCCGCGC CATCTTTCTC GACGGCAAGG CAGGGATGAT CCAGAACAGC
ACGGGTGCGG CCTATCGCTT GCTGAAGACC GACATCCACT GGGGCGTGAC GACCTTGCCA
CTTGGTCCTT CGGCCAAGGG CCCCGGCACG CTGTTGATCA CCGATAGCCT GGCGATCTTC
AAGGGCTCCG GTGTCGAGGA CAAGGCAACG GAATTTGCCA AATACATTAC CTCGCCGGAA
CCGCAGGAAG AATACGAACT GACGACCGAT TCCGGCCTGA CGCCGCTTCG TCCTTCCGCT
AAGGTTGAGC AGTTGATCAA GGATAAGCCT TACTGGAAGC CGTTCATTGA TGGTATCGCC
TTCGGTGGTC CTGAGCCTTT GTTCAAGGAT TACAAGGGTT TCCAGAATGT GATGATCGAA
ATGGTCCAGT CTGTTGTCAC TGGTAAGGCC GAGCCTGCTG AGGCCTTGAA AAAGGCGTCG
GCTGCTATCG ACCAGTACAA GTAA
 
Protein sequence
MKNTLTIMAG ALALLASSAL SSFAADKEIS WIYCGDKIDP IHEKYIKVWE GKNPGWKIAP 
EVVGWEQCQD KATTLAAAGT PVAMAYVGSR TLKEFAENDL IVKVPMTDAE KKSYYPNIVD
TVTFDDTQWG VPIAFSTKAL FWNKDLFKKA GLDPETPPKT WAEEIAFAKQ IKEKTGIAGY
GMPAKTFDNT MHQFMHWVYT NNGQVMNKDG KIVMDSPEVL AALQAYKDIA PYSVEGATAY
EQNEIRAIFL DGKAGMIQNS TGAAYRLLKT DIHWGVTTLP LGPSAKGPGT LLITDSLAIF
KGSGVEDKAT EFAKYITSPE PQEEYELTTD SGLTPLRPSA KVEQLIKDKP YWKPFIDGIA
FGGPEPLFKD YKGFQNVMIE MVQSVVTGKA EPAEALKKAS AAIDQYK